Gene Rpic_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0328 
Symbol 
ID6289519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp345770 
End bp346351 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID642623895 
Productputative transmembrane protein 
Protein accessionYP_001897918 
Protein GI187927431 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT GGATCGACAC GCTTTTTGCC ACGCTCGCCC TGCCAAAGGT CGGGCTGCCC 
GCCATCTTCG TCGTCAGTTT CATTTCGGCG ACGCTCTTGC CGCTGGGCTC AGAGCCCGCC
GTGTTTGCTT ACATCAAGCT CAATCCGGAG ATGTTCTGGC CGGCCATCAT TGTCGCCACG
CTCGGCAACA CGCTGGGCGG CGTGGTCGAC TGGTGGATGG GCTACGCGGC CAAGCTGGCG
CTGGTGCGCT ACCACCTGGG GCGCCGCCGC CGGCAGCACA ACGTCGAGCA CGCCCATCAC
GTGCCGCACC CCAAGCGCCA CCGTGAACCT CCGCTCGACA AGAAGTACTT CCGCTGGATG
CGCCGCATCG GGCCGGTGTC GCTGCTGGTG TCGTGGCTGC CGGGCATCGG CGATCCGCTG
TGCACGCTGG CCGGCTGGCT GCGCCTGAAG TTCTGGCCGA GCGTCATGTA CATGGCGATC
GGCAAATTCC TGCGCTATCT GGCGATGACA GCAGCGCTCA TGACCTTGCC CGACGGCTTC
TGGCACGGCA TCCTGGGCTG GATCAAGAGC GTGATGATGT GA
 
Protein sequence
MEQWIDTLFA TLALPKVGLP AIFVVSFISA TLLPLGSEPA VFAYIKLNPE MFWPAIIVAT 
LGNTLGGVVD WWMGYAAKLA LVRYHLGRRR RQHNVEHAHH VPHPKRHREP PLDKKYFRWM
RRIGPVSLLV SWLPGIGDPL CTLAGWLRLK FWPSVMYMAI GKFLRYLAMT AALMTLPDGF
WHGILGWIKS VMM