Gene Rpic_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0327 
Symbol 
ID6287895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp344465 
End bp345712 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID642623894 
Productnucleoside recognition domain protein 
Protein accessionYP_001897917 
Protein GI187927430 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTGA ATCTCGTCTG GCTCGCCTTC TTTCTCGTCG CCTTCGTTAC CGCATGCGTG 
CAGGTGGTGC AGGGCGACAT GGAAGTCTTC TCCCGCATGC TGACCGGTAT GTTCGATGCC
GCGCGCACCG GCTTCGAAAT CGCGATCGGC CTGACCGGCA TGATGGCGCT GTGGCTGGGC
ATCATGCGCG TGGGCGAGCG CGCCGGCGTG GTCGATCTGT TCGCGCGCCT CGTGAACCCG
CTGATGCGGC ACCTGTTTCC TTCCGTGCCC GCCGGCCACC CCGCCAACGG CGCGATGATG
ATGAACGTGT CGGCCAACGT GCTCGGGCTG GATAACGCCG CCACTCCACT GGGCCTGCAG
GCCATGCGCG AGCTGCAGCA GATCAATCCG CAGCCGCAAC GCGCCAGCGA TGCGCAGTTG
ATGTTCGTGG TGCTCAACAC AGCGGGGGTG ACGCTGGTGC CCACCTCCGT CATCGCCATC
CGCCAGGCCA TGGCCGTCAA GCAGGGCCTG GTCGGTTTCA ATGCGGCTGA CATCTTCCTG
CCGACCTTGC TGTCCACGTT CATCGGCTTC TGCGCGGGCA TCGCGGCGGT GGCGTGGTAT
CAGCGGATCA ACCTGTTCAA GCCTGCCCTG CTGGCGTATT TCGGGGGCTT TGTCGCGACG
ATGGGGTTGC TGTTTGCGTG GCTGCGCCAG TTTCCGCCGC AGCAGATGGC GGCGTGGATC
GGCCTGATCG GCGCGGGTGC CATCCTGACC ATTGTCGTGG CGTTCCTGGT CTGCGGGGCC
ATTCGCCGCA TCAACGTTTA CGAAACCTTT GTCGATGGCG CCAAGGACGG CTTCCAGGTG
GCGATCGGCA TCGTCCCGTA TCTGGTGGCG GTGCTCGTGG GCATCGCCGT GTTTCGCGCG
GCGGGGTGCA TGGATTTCCT GATGCAGGGG CTTTCCGTGC TGTTCACGCA CCTCGGCATC
GACACGCGCT TTGTGCCGGC GCTGCCCGTG GGGCTGATGA AGACGCTGTC GGGCGCCGGC
GCGCGCGGCC TGATGGTCGA CGTGATGACC ACCTACGGCG TCGATTCCTT CCAGGGCAAG
CTGGCCGCCA TCATCCAGGG CTCGACCGAG ACCACGTTCT ACGTGCTGGC CGTGTATTTC
GGCAGCGTCG GCATCAAGGA CACGCGTTAC GCGCTGGCCT GCGGGCTGTG GGCCGACCTG
GTCGGGCTGA TCGGCGCCGT GCTTGTTGCC TACCTGTTCT TCGCCTGA
 
Protein sequence
MALNLVWLAF FLVAFVTACV QVVQGDMEVF SRMLTGMFDA ARTGFEIAIG LTGMMALWLG 
IMRVGERAGV VDLFARLVNP LMRHLFPSVP AGHPANGAMM MNVSANVLGL DNAATPLGLQ
AMRELQQINP QPQRASDAQL MFVVLNTAGV TLVPTSVIAI RQAMAVKQGL VGFNAADIFL
PTLLSTFIGF CAGIAAVAWY QRINLFKPAL LAYFGGFVAT MGLLFAWLRQ FPPQQMAAWI
GLIGAGAILT IVVAFLVCGA IRRINVYETF VDGAKDGFQV AIGIVPYLVA VLVGIAVFRA
AGCMDFLMQG LSVLFTHLGI DTRFVPALPV GLMKTLSGAG ARGLMVDVMT TYGVDSFQGK
LAAIIQGSTE TTFYVLAVYF GSVGIKDTRY ALACGLWADL VGLIGAVLVA YLFFA