Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0318 |
Symbol | |
ID | 6288737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 333949 |
End bp | 335664 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623885 |
Product | AMP-binding domain protein |
Protein accession | YP_001897908 |
Protein GI | 187927421 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.922079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTG AGGTTTTCGA CGCGCGACCG CGCAACGGTG CGTCGTATGT GGTGGGCGAC ACGTCGGTGC CGCTGGCACA TGTCACGGTC TCGGCGTTGC TGGCGGATAC CGTGCGCCGC TGCCCCGACG ACGAGGCGGT CGTGTTCCGC GAGCAGAACG TGCGCTGGAC GTGGCGTACC TTTGCTGAAC AGGTCGATGC GCTGGCCGCC GGCCTGCACG CACTGGGGTT CGAACGCGGC GACCGCATCG GCATCTGGTC GCCCAACCGC GTCGAATGGG TGCTCACGCA GTTCGCGACA GCGCGCCTGG GGCTCATCCT CGTCAACATC AACCCGGCAT ATCGGCTGTC GGAACTGGAA TACGCGCTCA ACAAGGTCGG CTGCAAGGCC ATCGTGGCGG CCGAGGCCTT CAAGACATCG CGCTATCTGG AGATGCTGCA GACACTCGCG CCCGAACTGG CGACCGCGCA GCCGGGCGCG CTGAACGCGG CCAAGCTGCC GGCCCTGCGC TGGGTCATCC GGATGGGCGA GGCCGGCACG CCTGGCATGC TCAACTTTGC CGACGTTGTT GCGCGTGGAA AAAGCGTACC CGTTGATGCG CTGGATGCCA TCACGGCCAC GCTGTCGCCC GACGACGCCA TCAACATCCA GTTCACCAGC GGCACGACCG GCGCGCCCAA GGGCGCCACG CTGACGCATG TGAACGTCGT CAACAACGCG CGCTTCGTTG CCATGGCGAT GAACCTGCAA GAGGGTGATC GACTGTGCAT TCCCGTGCCG CTGTATCACT GCTTCGGCAT GGTCATGTCG GTGCTGACCT GTACGGCCAC GGGCGCGTGC ATGGTGTTTC CGGGCGAGGC ATTCGATCCG CTGGCCACGC TACGCACGGT GGCGGAAGAA CGCTGCACGC AACTGCACGG CGTGCCGACG ATGTTCATCG CGCAGCTCGA TCATCCGGAC TTCAAGAGCT TTGACGTATC GACGCTGCGC GGCGGCATCA TGGCCGGCTC GCCGTGTCCC ATCGAGGTGA TGAAGCGCGT CGTGTCGGAA TTGAATCTGC GCGAAGTCAC CATCGCGTAC GGCATGACAG AGACGAGCCC CGTGTCTTTC CAAAGCGCGG TGACGGACCC GCTCGACAAG CGCGTTACCA CCGTCGGCCG CATCCAGCCG CATCTGCAGG TCAAGCTGGT GGATGGCGCG GGAGAGGTGG TGCCCGTGGG TGAGAAGGGC GAGCTGTGCA CCAAGGGCTA TTCAGTCATG CTCGGCTACT GGGACGACGA AGCCAAGACC GCCGAGTCCA TCCACGACGG CTGGATGCGC ACGGGCGATC TGGCAACGTT CGATGCCGAG GGCTACTGCA ACATCGTCGG CCGCGTGAAG GACATGCTCA TCCGCGGTGG CGAGAACGTC TACCCGCGCG AGATCGAAGA GTTCCTCTTC CGGCATCCGA AGGTGCAGGC CGTCAACGTG TTTGGCGTGC CCGACCCAAA GTATGGCGAA GAGGTTTGCG CGTGGATCGT GCTCAAGCCC GGCCAGCAGG CCACGGAAGA GGAGATCCGC ACGTTCTGCC AGGGCCAGAT CGCGCACTAC AAGATTCCGC GCTACATCCG CTTCGTCACC GAGATGCCGA TGACGGTGAC GGGAAAGGTG CAGAAGTTCG TCATGCGCGA CCGCATGGTC GAAGAACTCA AGCTGACGGT GGCCGCCACG GCCTGA
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Protein sequence | MAGEVFDARP RNGASYVVGD TSVPLAHVTV SALLADTVRR CPDDEAVVFR EQNVRWTWRT FAEQVDALAA GLHALGFERG DRIGIWSPNR VEWVLTQFAT ARLGLILVNI NPAYRLSELE YALNKVGCKA IVAAEAFKTS RYLEMLQTLA PELATAQPGA LNAAKLPALR WVIRMGEAGT PGMLNFADVV ARGKSVPVDA LDAITATLSP DDAINIQFTS GTTGAPKGAT LTHVNVVNNA RFVAMAMNLQ EGDRLCIPVP LYHCFGMVMS VLTCTATGAC MVFPGEAFDP LATLRTVAEE RCTQLHGVPT MFIAQLDHPD FKSFDVSTLR GGIMAGSPCP IEVMKRVVSE LNLREVTIAY GMTETSPVSF QSAVTDPLDK RVTTVGRIQP HLQVKLVDGA GEVVPVGEKG ELCTKGYSVM LGYWDDEAKT AESIHDGWMR TGDLATFDAE GYCNIVGRVK DMLIRGGENV YPREIEEFLF RHPKVQAVNV FGVPDPKYGE EVCAWIVLKP GQQATEEEIR TFCQGQIAHY KIPRYIRFVT EMPMTVTGKV QKFVMRDRMV EELKLTVAAT A
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