Gene Rpic_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0303 
Symbol 
ID6287735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp319563 
End bp320780 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID642623871 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_001897894 
Protein GI187927407 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCCG TCCTGCTCAC GCATTTCACC GCCACGAGCT GCCTCGGACG TGGCCTTGAC 
GCCACGCTCG ACGCGTTGCG CGGGCAACGG GGCGGCCTCG CGCCGTGCAC CTTCCCGCGC
GCCGATCTCG ACACGTGGAT CGGCGAAGTG CCTGGCGCCG ATGCCGCGCC CGTGCGCGCA
GACCTGGCCG ATTTCGATTG CCGCAACAAC AGGCTCGCCC AGATCGGCCT CACACAGGAC
GGTTTTGCCG AAAGCGTTGA AGCCGCCAAG GCACGCCACG GCGCCGGACG CGTCGGCGTA
TTCATCGGCA CCAGCACGTC GGGCATTCTC GAAACCGAAC GCGCCTACCA GCAGCGCGAT
CCGCAAACGG GCGCGCTGCC GGCCAGCTTT CACTACGCGC AGACGCACAA TATCTATTCT
CCAGCCGCAT TTGTGCGCGC GTACTTCGGA TTGAGCGGGC CGGCCACGGC GATCTCGTCG
GCGTGCTCGT CGGGGGCCAA GGTGTTTGCC TCGGCGCGGC GCATGTTGGC TGCGGGCCTG
ATCGATGCGG CGGTGGTTGG TGGTGTCGAT TCGCTGTGCC TGACGGCGCT GTACGGGTTC
AACTCGCTGG AGCTGCTGTC GCGGCAACCG TGCCGGCCGT ACGACGTGGC GCGTGACGGC
ATCTCCATCG GCGAGGCCGC CGCCTTTGCG CTGCTGGAGC GTGCCCCCGA GGCAAACGAC
GCGCTGGACG ACGATGCCAT CCTGCTGCTC GGCATTGGCG AATCGAGCGA TGCGCATCAC
ATGTCGTCGC CGCACCCCGA AGGGCTGGGG GCACGCGCTG CCATGGCGCA AGCGCTCGCT
ACCAGCGGCC TGAGCACGGC GGACATCGAC TACATCAACC TGCACGGCAC CGGCACACCC
AGCAATGACG CAGCGGAGTC CCGCGCCATC CAGGCGCTGT TCCACGGCAC GGCGTGCAGT
TCGACCAAGG GCGCGACCGG CCACACGCTG GGCGCGGCCG GAGCTTTGGA AGCCGTGATC
ACAGCACTGG CGCTGCGCCA TCAATTTCTG CCTGCCGGCA TCAACACCAC GCAGCCGGAC
CCGGCGCTCA TCGCCAACTA TCTGACGGAG AGCGGCCACG CCCGCGTTCG CACGGCACTC
AGCAACGCCT TCGGATTTGG CGGCACGAAT TGCAGCCTGG TCTTCGGCCG CGCAGATCAC
CTGGGCCTGT CGTCATGA
 
Protein sequence
MKPVLLTHFT ATSCLGRGLD ATLDALRGQR GGLAPCTFPR ADLDTWIGEV PGADAAPVRA 
DLADFDCRNN RLAQIGLTQD GFAESVEAAK ARHGAGRVGV FIGTSTSGIL ETERAYQQRD
PQTGALPASF HYAQTHNIYS PAAFVRAYFG LSGPATAISS ACSSGAKVFA SARRMLAAGL
IDAAVVGGVD SLCLTALYGF NSLELLSRQP CRPYDVARDG ISIGEAAAFA LLERAPEAND
ALDDDAILLL GIGESSDAHH MSSPHPEGLG ARAAMAQALA TSGLSTADID YINLHGTGTP
SNDAAESRAI QALFHGTACS STKGATGHTL GAAGALEAVI TALALRHQFL PAGINTTQPD
PALIANYLTE SGHARVRTAL SNAFGFGGTN CSLVFGRADH LGLSS