Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0294 |
Symbol | |
ID | 6287577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 311890 |
End bp | 313386 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623862 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001897885 |
Protein GI | 187927398 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGGAC GAGGGGAGGC AGTGCTATCT CGACGGCTCT CGCTGGTATT CGCTGTGCTG TTGCTGGTGT GCTGCGGCAC TTCGGCTTGG CTGCAATTGC GCTCGAACGG ACGTCACGAG CAGGAGGTGA TCCAACGCTT GTCGAGCGGG TTGGCCGCAC ACATCGCGGA GAATGCCGAA CTGATGCGAC CGGAAGGACT AAACCCTGTC GCGGTGAAAG ATCTGTTCGA CAAACTGATG GCGGTGAATC CTAGCGTAGA GGTCTACCTG CTCTCGCCTG ACGGCCACAT TGCGGCGCAA GCGGCGCCCC CCGGCCACCT CAAGCGCGAC CGCGTCGACC TCGCACCGGT GCGCAGACTG CTCGCTGGTG CGACGATGCC GGTCCTCGGT GACGATCCAC GCAACTTGCA AACGCCCAAA GTTTTTAGCG CCGCGCCGAT GCGCGTTGAT GGCCGAGACG CAGGTTACGT CTACGTGGTG CTGCAGGGCG AGGACCACGA CGCCGTTGCC GCGCACGTGG CGGCTGACAA CGTTTTGCGG ACAACGCTGT GGTCCATGGG GCTGGTGGCT CTTCTCGGGC TTGTAGCGGG CACGGTGGCG TTCTGGCTCA TCACGCGGCC TCTGCGCGAG CTGACGGCTG TAGTCCGACG CTTCGAATCC GAAGGAATCG GATCGCTCGA AAGCCAAACG GCGACGCTGG AGCGCATTGC GCGCGGTGGC GGAGAAATAG CGACACTGAG CCAGGCCTTC GTGCAGATGA CGCGGCGCAT TGCTGAGCAG TGGCGAGAGC TGACGCTGCA GGACCAGCAG CGCCGCGAAC TCGTCGCCAA TATCTCGCAT GACCTGCGCA CGCCCCTGAC TTCACTACAC GGCTACCTGG AAACGCTCCG ACTGAAGGCC GGTATCCTCG ACGACGAAGA GCGCCGCCGC TACCTCGACA TTGCGCTCGG TCAGAGCCGC AAGGTTGGCC GGCTCGCACA GGAGCTATTT GAGCTAGCAC GGCTTGAGTA CGGCGTGGTT AAGCCAGAAA AGGAAAATTT CGCGTTGGCC GACCTGGTAC AAGACGTGTT TCAGAAGTTC GAGTTGGCAG CAGGGGCGCG TCAGCAACAA CTCAAGCCAG ACATTGCGCC CGGTCTGCCC ATCGTGTCGG CCGACTTGGG CATGATCGAG CGCGTGTTAA CAAACCTGCT CGACAACGCC ATCCACCATA CGCCAGTAGG CGGCGCGATC GAGGTGCAGT TGCGTCCAAC GAATACTGGG GTCGCGGTCC AGGTTAGCGA CACCGGGCCG GGTATCCCAG GTGAACTTCA GAAGGGACTC TTCGTGCGTC CAGTGTTCAT GAGCGGTGCC CGCAGCGATG GCTCACGCAG CGGTGGGCTC GGGCTGATGA TCGTGCAGCG AATCCTGCAG CTGCATGGCA GCGAAATCCG GCTGGTGCCG CAGCCCGGAA AGGGTGCGGT GTTTTGCTTC CAGTTGGCGG GTGCCGCCAG TGGGTGA
|
Protein sequence | MSGRGEAVLS RRLSLVFAVL LLVCCGTSAW LQLRSNGRHE QEVIQRLSSG LAAHIAENAE LMRPEGLNPV AVKDLFDKLM AVNPSVEVYL LSPDGHIAAQ AAPPGHLKRD RVDLAPVRRL LAGATMPVLG DDPRNLQTPK VFSAAPMRVD GRDAGYVYVV LQGEDHDAVA AHVAADNVLR TTLWSMGLVA LLGLVAGTVA FWLITRPLRE LTAVVRRFES EGIGSLESQT ATLERIARGG GEIATLSQAF VQMTRRIAEQ WRELTLQDQQ RRELVANISH DLRTPLTSLH GYLETLRLKA GILDDEERRR YLDIALGQSR KVGRLAQELF ELARLEYGVV KPEKENFALA DLVQDVFQKF ELAAGARQQQ LKPDIAPGLP IVSADLGMIE RVLTNLLDNA IHHTPVGGAI EVQLRPTNTG VAVQVSDTGP GIPGELQKGL FVRPVFMSGA RSDGSRSGGL GLMIVQRILQ LHGSEIRLVP QPGKGAVFCF QLAGAASG
|
| |