| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0285 |
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| Symbol | |
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| ID | 6288272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 304111 |
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| End bp | 306174 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623854 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001897877 |
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| Protein GI | 187927390 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGCG CCCCCAGCGA CCCTGCTCCG ACCAATGATG CGCGCGTGAG CCAGGTCTCA
AGCGCCTGGA ACCTGCTCGA TACCCCCCTT AGCGGTACAT CGTGGCAACG GCAGCATGCC
GCCGTCATCG AACAGTCTCA TCGACGCTCC ACCACCTACG GCCTTCAAGT CACGGACAAC
CCCGACTTCA GCGCGCTGAG CAAGGCGGCG CTGTCGCTCG CAATCGAGCA GAACCGTACG
CTGTATGCGT ACGCTTTGCC CGTCATGGAA ACCCTTTACG AGCAGATCAG TCATCACCAC
AACATCGTGC TGCTCACTGA TGCCCAAGGC GTGATCCTCC ACGCGCAGGG CGACAAGGAC
TTCCTGGAGA AGGCCGACCG CGTGGCCTTG TCGCTGGGGG TGACGTGGTC CGAGCGCCTG
CGCGGTACCA ATGGCATCGG TACGGCACTT GTAGAAGGGG CGCCCGTCCA GGTCAGCGCC
AATGAGCATT ATCTTGGCGT CAACCATGTC CTCAACTGCT CTGCGGTCCC TCTTTTTGAC
GCATCCGGAA AGGTCACGGG TGTGCTCAAC GTCAGCGGAG ATCCGGGAAA TTTTCCGGCA
CACACCATGG CGCTGGTCCG GATGTCAGCG CTACAGATTG AAAATCAGCT GTTCGCTGCG
GCCAATCCCG ACTGCATCAC GCTGCACTTG CACAGCCGAC CCGAATTGAT CGGCACGCTC
ATGGAGGGGA TGCTGTCTTT TGGGCTGGAT GGGCGATATC GCGCGGTCAA TCGAAGTGCC
CTGTTCCAAC TCGGGCTGAC CCCGTCGGCG TTGGCCGGGC ACACGCTGGA ATCGCTCCTT
GGGCTCAGCG TGCCCGCGCT GTTTGATCAC TATCGTTCGG CAACGCCAGA TCCGCTGCGA
GTGCATGCTG CCAATGGTAT CAGCCTGTAT GCCAAGGTCT CGATCCGTCA ACGCACCGAT
TGCGGATCGC TGCTACGACC GCTGTCTGCA GACAAGGTGG GACAGGAGGC CGAGTCGCGT
GCCGGCACTG CGAGCCCGGT CCGGGCTCGG GCCACCTCAG GTCTGGGCCA GTTGGACACC
GGAGACCCGG AAATCGCAAG AGTGATCAGC AAGCTCAAAA AATTCAACGG CCGCGATATC
CCGACCCTCA TCATCGGCGA GACCGGTACC GGCAAAGAGC TCCTGGCCCA GGCTATCCAC
GAGGATTCAC CCCGCTGCGC AGGCCCGTTT GTTGCCGTCA ACTGTGCGTC GATTCCGGAG
ACCTTGATCG AATCAGAGCT CTTCGGGTAC GAGGAGGGCG CGTTCACCGG AGCCCGCCGG
CGCGGCAGCC TTGGCAAGAT CCTGCAGGCA AATGGCGGAA CGCTGTTCCT CGACGAGATC
GGCGATATGC CGCTGACGCT GCAGGCGCGA TTGCTGCGTG TGCTGCAAGA GCGCATCGTC
ACCCCCCTGG GCAGCGCCAA GGCGATTCCA GTCAATGTCG CATTGGTTTG CGCAACCCAT
CGCAATCTGC GCGACATGAT CGCCCGGGGT ACGTTCCGCG ACGATCTGTA CTACCGATTG
AACGGACTAT TGGTCAAGCT CCCGCCCTTG CGGCAGCGGC GTGACTTCGA GGCGGTGCTC
AATCGCCTCC TGGTTGGTGA GCACGGTGGT CAGCGCTTCC GGGTTGCCCC CGAAGTCCTG
CGCCTGTTGA AGACATACGA CTGGCCGGGG AACATACGCC AACTGGTCAA TCTCGTGCGT
TCGGCAATGG TCATGGCCGA GGGCGATGAG ATCCAGTTGG ATGATCTGCC AGACGATTTC
CTGGAAGATG TACGTCATCG GGAGCAACCG GCACAGGAGC CACCGGCACA CGACATGCTG
CCGGTATCGG CAGACCAGGC GACGTTGGAT CTACTGGAGT CCTCGCTCAT CCGGCAGGTG
CTCAAATCGA ACGGCGGCAA CGTGTCAGCC GCCGCACGCG CACTGGGTGT TTCGCGCAAT
CGCATCTACC GAAAGCTTCA GTCGCTTGGC GCCGCACCGA CAAGCGATCT GCAGTCGCCG
CAACGTGACT CGCGTCCCCT ATAG
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| Protein sequence | MPGAPSDPAP TNDARVSQVS SAWNLLDTPL SGTSWQRQHA AVIEQSHRRS TTYGLQVTDN
PDFSALSKAA LSLAIEQNRT LYAYALPVME TLYEQISHHH NIVLLTDAQG VILHAQGDKD
FLEKADRVAL SLGVTWSERL RGTNGIGTAL VEGAPVQVSA NEHYLGVNHV LNCSAVPLFD
ASGKVTGVLN VSGDPGNFPA HTMALVRMSA LQIENQLFAA ANPDCITLHL HSRPELIGTL
MEGMLSFGLD GRYRAVNRSA LFQLGLTPSA LAGHTLESLL GLSVPALFDH YRSATPDPLR
VHAANGISLY AKVSIRQRTD CGSLLRPLSA DKVGQEAESR AGTASPVRAR ATSGLGQLDT
GDPEIARVIS KLKKFNGRDI PTLIIGETGT GKELLAQAIH EDSPRCAGPF VAVNCASIPE
TLIESELFGY EEGAFTGARR RGSLGKILQA NGGTLFLDEI GDMPLTLQAR LLRVLQERIV
TPLGSAKAIP VNVALVCATH RNLRDMIARG TFRDDLYYRL NGLLVKLPPL RQRRDFEAVL
NRLLVGEHGG QRFRVAPEVL RLLKTYDWPG NIRQLVNLVR SAMVMAEGDE IQLDDLPDDF
LEDVRHREQP AQEPPAHDML PVSADQATLD LLESSLIRQV LKSNGGNVSA AARALGVSRN
RIYRKLQSLG AAPTSDLQSP QRDSRPL
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