| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0268 |
|---|
| Symbol | |
|---|
| ID | 6286605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 282049 |
|---|
| End bp | 283032 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642623839 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_001897862 |
|---|
| Protein GI | 187927375 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCGA ATTTCAATCC AGACCGAGCG CTTGCGCTGG CGCAGCAAAC CTTCGACATC
GAAGCGCGAG CCGTACTCGG TCTCAAGACC CAGGTGTCCG CCGACTTTGC GCGCGCGGTC
GAAATGGTGC TCGGCTGCAC CGGCCGCGTC GTCGTGTCAG GCATGGGCAA ATCGGGCCAC
GTGGCGCGCA AGATTGCCGC CACACTGGCC TCGACCGGCA CGCCGGCCTT CTTCGTGCAC
CCGGCCGAAG CGAGCCATGG CGATCTCGGC ATGGTCACCC GCGACGACGT TTTCATCGGC
TTTTCCAATT CCGGCGAAGT GTCGGAGCTG AACGTCATCC TGCCGCTGGT CAAGCGGATG
GGCGCCAAGC TGATCGCCGT CACGGGCAAC CCGGGGTCCT CGCTCGGCAA GCATGCCGAC
GTGGTGCTCA ACTCGCACGT CGACGTCGAA GCCTGTCCGC TGAACCTTGC CCCCACCGCC
AGCACTACCG CGCAGATCGC GCTGGGCGAT GCGCTAGCCG TGGCCGTGCT CGACGCACGC
GGCTTCGGTG CAGAAGACTT CGCACGCTCG CATCCGGGCG GATCGCTCGG CCGCAAGCTG
CTGACGCACG TGCGCGACGT CATGCGCGCC GGCGACGCCA TCCCCCGCGT GGACCAAGAC
ACGCCGCTGT CGCAGGCGCT GATGGAAATC ACCCGCAAGG GCATGGCGAT GACCGCCGTG
GTCGATGCCC AAGGCCACGC CGTGGGCGTG TTCACCGACG GCGACCTGCG CCGCCTGCTC
GAGACCCCGC GCGACTGGCG CACCGTGCCA ATCAACGAGG TCATGCATCG CAACCCGCGC
TCGATCGGCC CCGACCAGCT CGCCGTTGAA GCCGTCGAAG TCATGGAAAC GCACCGCATC
AACCAGTTGC TGGTGGTCGA TGCCGCCGGC CTGCTGGTGG GCGCGCTGCA CATCCACGAC
CTGACGCGGG CCAAGGTCAT CTGA
|
|---|
| Protein sequence | MIANFNPDRA LALAQQTFDI EARAVLGLKT QVSADFARAV EMVLGCTGRV VVSGMGKSGH
VARKIAATLA STGTPAFFVH PAEASHGDLG MVTRDDVFIG FSNSGEVSEL NVILPLVKRM
GAKLIAVTGN PGSSLGKHAD VVLNSHVDVE ACPLNLAPTA STTAQIALGD ALAVAVLDAR
GFGAEDFARS HPGGSLGRKL LTHVRDVMRA GDAIPRVDQD TPLSQALMEI TRKGMAMTAV
VDAQGHAVGV FTDGDLRRLL ETPRDWRTVP INEVMHRNPR SIGPDQLAVE AVEVMETHRI
NQLLVVDAAG LLVGALHIHD LTRAKVI
|
|---|
| |