| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0263 |
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| Symbol | |
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| ID | 6289265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 277725 |
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| End bp | 279236 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623834 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_001897857 |
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| Protein GI | 187927370 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGT CGCTCCAGCT CCGTCTCTCT CAGCATCTCG CGCTCACGCC GCAGTTGCAG
CAATCGATCC GACTGCTGCA GTTGTCGACC ATCGAACTGC AGCAGGAAGT TGAACAGGCC
CTGACCGAAA ACCCGCTGCT GGAGCGGGAA AACGAGTGGC TCGACACCTC CGCCCGCATT
GGAGCGGACG GCTCCTTGAA CGCGCTGCAA AGCAACAGCG CGACGCCCCT GCCCACCGAA
TCGCCTCCGC CCGCACCCAA CGGCGGCGAC AGCAGCGACA GCTCGGACAG CAGCTACGAA
AACGGCCACG ACAACGGTGC CGATTTCGAC AGCGATTACG GCTCCGACCG CTCCGACTGG
AGCCTCGACG ACTTCGCCCG CAAGCCGCAA TCCGACGAAG ACGATCGCGC GCCACTGCAG
TTGCGCGAAG CCGAGCAAAG CCTGCGCGAA TTCCTCATGG AACAACTCGC GCCGCTCAAG
CTCTCGATGC GCGACAAGGG CCTCGTCATC TTCCTGATCG AATCGCTCGA CGACGAAGGT
TATCTCTCAG GCACGCTCGA CGAAATCCTC GCAGACCTGC CGCCCGAACT CGAAGTCGAA
CTCGACGAAC TGCAAGCCGC GCTGCGCATG CTGCAGAGCT TTGATCCGCC CGGCATTGGC
GCGCGCTCAG CGGCCGAATG CCTGTCGTTG CAATTGCATC GGCTCGATTC GCCAGCGAAA
GGGCTGGCGC TCATCATCGT TAATCAGCAC CTCGAACTGC TGGCCGCGCG CGACTACACG
CGCTTGAAGA AGGCATTGTG CGTCGACGAA CCCACACTGA AAGCTGCGCA TGAGCTGATT
CGTTCACTGG CACCGTTTCC GGGTCATGCA TTCGGCCGCG CCGAAGCGGA TTTCGTGGTG
CCCGACGTGA TTGTGCGCAA GACAAGCGCA GGCTGGATGG CGCAACTGAA CCCCGACGTC
ATGCCGCGGC TGCGCATCAA CGACATGTAC GCGCAGATCC TGCGCAGCAG CCGCGGTGAA
TCGGGCGCTG CCAATCTGCA GCAGAAGCTG CAGGAAGCAC GTTGGCTGAT CAAGAACATC
CAGCAGCGCT TCGATACGAT CCTGCGTGTC TCGCAAGCGA TTGTCGAGCG TCAAAAGAGC
TTCTTCACGC ACGGCGAAAT CGCCATGCGC CCCTTGGTTT TGCGGGAAAT AGCCGATACA
CTGGGTCTAC ACGAGTCCAC GATCTCCCGT GTGACAACGA ACAAATACAT GGCGACCCCG
ATGGGGACGT TCGAGTTGAA GTACTTCTTC GGCAGCCATG TATCGACGGA AACCGGCGGG
GCCGCGTCGT CCACTGCGAT ACGCGCGCTC ATCAAGCAAC TTGTAGGAGC CGAAGACCCG
AAGAATCCTC TGTCCGATAG CAGAATTGCC GAGCTGTTAG GCGAACAAGG ATTCGTGGTG
GCCCGTCGGA CGGTGGCCAA ATACCGCGAA GCCCTCAAGA TCCCTGCAGT GAATTTGCGC
AAGTCTTTAT AG
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| Protein sequence | MKQSLQLRLS QHLALTPQLQ QSIRLLQLST IELQQEVEQA LTENPLLERE NEWLDTSARI
GADGSLNALQ SNSATPLPTE SPPPAPNGGD SSDSSDSSYE NGHDNGADFD SDYGSDRSDW
SLDDFARKPQ SDEDDRAPLQ LREAEQSLRE FLMEQLAPLK LSMRDKGLVI FLIESLDDEG
YLSGTLDEIL ADLPPELEVE LDELQAALRM LQSFDPPGIG ARSAAECLSL QLHRLDSPAK
GLALIIVNQH LELLAARDYT RLKKALCVDE PTLKAAHELI RSLAPFPGHA FGRAEADFVV
PDVIVRKTSA GWMAQLNPDV MPRLRINDMY AQILRSSRGE SGAANLQQKL QEARWLIKNI
QQRFDTILRV SQAIVERQKS FFTHGEIAMR PLVLREIADT LGLHESTISR VTTNKYMATP
MGTFELKYFF GSHVSTETGG AASSTAIRAL IKQLVGAEDP KNPLSDSRIA ELLGEQGFVV
ARRTVAKYRE ALKIPAVNLR KSL
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