Gene Rpic_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0249 
Symbol 
ID6288149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp263325 
End bp263951 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content61% 
IMG OID642623819 
Product50S ribosomal protein L25/general stress protein Ctc 
Protein accessionYP_001897843 
Protein GI187927356 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG TCGCTTTCGA GCGTAGCGTT CAGGGCACTG GTGCGAGCCG CCGCCTGCGC 
AATTCCGGCA AGACCCCGGC CATCATTTAC GGCGCTGGCG CCGAGCCGAA GCTGATCGAA
CTCGATCACA ACGCGCTGTA CCACGCGCTG AAGAAGGAAG CCTTCCACTC GTCGATCCTC
GACATCGAAG TGGCTGGCAA GGTTGAAAAG GCGCTGCTGC GTGACTTCCA ACTGCACCCG
TTCAAGCAAC TGGTTCTGCA CGTCGACTTC CAACGCGTGT CGGCCAAGGA AAAGATCCAC
GTCAAGGTGC CGCTGCACTT CCTGAACCAG GAAACCGCAC CGGGCGTGAA GCTGGGCCAC
GGCATCGTGA ACCACATCCT GAACGACGTC GAAGTGTCGT GCCTGCCGGC CGACCTGCCG
GAGTTCATCG AAGTGGATCT GGGTACGCTG GAAATCGGCC AGACCCTGCA CATCGCTGAC
CTCAAGCTGC CGAAGGGCGT GACCATCCTC ACCCACGGTG GCGATGAGAA CCCGGCTGTT
GCCAACATCA GCGTGCCGGC TGGCGAGAAG TCCGCTGCCG CCGAAGAAGG CGCTGCTGCT
GCAGGCGAAG ACAAGCCGGC AGCCTAA
 
Protein sequence
MKVVAFERSV QGTGASRRLR NSGKTPAIIY GAGAEPKLIE LDHNALYHAL KKEAFHSSIL 
DIEVAGKVEK ALLRDFQLHP FKQLVLHVDF QRVSAKEKIH VKVPLHFLNQ ETAPGVKLGH
GIVNHILNDV EVSCLPADLP EFIEVDLGTL EIGQTLHIAD LKLPKGVTIL THGGDENPAV
ANISVPAGEK SAAAEEGAAA AGEDKPAA