Gene Rpic_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0233 
Symbol 
ID6289670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp248072 
End bp248941 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID642623803 
ProductPirin domain protein 
Protein accessionYP_001897827 
Protein GI187927340 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA TCCAGCACAT CATTGGCCCG CACGTGCGGG ACCTCGGCGG TTTCTCGGTC 
AAGCGCGTGC TGCCCTCGGC AGCGCGTCAG ACGGTGGGGC CGTTCATCTT CTTCGATCAC
ATGGGCCCGG TGAATTTCGC CCCCGGCGAG GGCATCGACG TGCGCCCGCA CCCGCACATC
GGGCTGGCCA CCGTCACGTA CCTGTTTGAC GGCAGCATGG TCCACCGAGA CAGCCTCGGC
AGCGTGCAGA CCATCACCCC CGGCGACGTG AACTGGATGA CGGCCGGCAA CGGCATCGTC
CACTCCGAGC GTTCCTCGCC GGAAGGGCGC GAAAAGGGCG CGCGCATGCA CGGCATCCAG
ACCTGGGTAG CGCTGCCGAA GGACCAGGAA AAGGTCAACG CCAGCTTCGC GCACCATGCG
GCCGAGACGC TGCCCAAGCT GGAGTGCCCA GGCGTGCAGG GCGTGGTCAT CGCGGGAGAT
GCGTTCGGGC TGACGTCGCC GGTGAAGGTG AGTTCGCGCA CGCTGTATGT GGCGCTGGAA
CTCGCGGCCG GCGCATCGCT GGTGATTCCG CCTGAGCATG CAGACCGTGG CCTGTATCTG
GTCGACGGCG CCGTCACCAT CGACGGCGAG GCGCTCGACC CGCAGCACCT GGCCGTGCTG
GAGCCCGGCG GCGACGTGAC GCTCACCGCG CAGGCATCGT CACGCGTGAT GCTGCTGGGC
GGTGCCCCGA CCGATGGCCA CCGTCACATC TACTGGAACT TCGTCGCCAG CGACAAGGCC
GACATTGAAG ACGCCAAGCA GCGCTGGGAG AGCGACGCCT TCGCTCACGT GCCCGGCGAA
ACGGAGCGCA TTCCGCTGCC GTCCAAGTAA
 
Protein sequence
MTSIQHIIGP HVRDLGGFSV KRVLPSAARQ TVGPFIFFDH MGPVNFAPGE GIDVRPHPHI 
GLATVTYLFD GSMVHRDSLG SVQTITPGDV NWMTAGNGIV HSERSSPEGR EKGARMHGIQ
TWVALPKDQE KVNASFAHHA AETLPKLECP GVQGVVIAGD AFGLTSPVKV SSRTLYVALE
LAAGASLVIP PEHADRGLYL VDGAVTIDGE ALDPQHLAVL EPGGDVTLTA QASSRVMLLG
GAPTDGHRHI YWNFVASDKA DIEDAKQRWE SDAFAHVPGE TERIPLPSK