Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0233 |
Symbol | |
ID | 6289670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 248072 |
End bp | 248941 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642623803 |
Product | Pirin domain protein |
Protein accession | YP_001897827 |
Protein GI | 187927340 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA TCCAGCACAT CATTGGCCCG CACGTGCGGG ACCTCGGCGG TTTCTCGGTC AAGCGCGTGC TGCCCTCGGC AGCGCGTCAG ACGGTGGGGC CGTTCATCTT CTTCGATCAC ATGGGCCCGG TGAATTTCGC CCCCGGCGAG GGCATCGACG TGCGCCCGCA CCCGCACATC GGGCTGGCCA CCGTCACGTA CCTGTTTGAC GGCAGCATGG TCCACCGAGA CAGCCTCGGC AGCGTGCAGA CCATCACCCC CGGCGACGTG AACTGGATGA CGGCCGGCAA CGGCATCGTC CACTCCGAGC GTTCCTCGCC GGAAGGGCGC GAAAAGGGCG CGCGCATGCA CGGCATCCAG ACCTGGGTAG CGCTGCCGAA GGACCAGGAA AAGGTCAACG CCAGCTTCGC GCACCATGCG GCCGAGACGC TGCCCAAGCT GGAGTGCCCA GGCGTGCAGG GCGTGGTCAT CGCGGGAGAT GCGTTCGGGC TGACGTCGCC GGTGAAGGTG AGTTCGCGCA CGCTGTATGT GGCGCTGGAA CTCGCGGCCG GCGCATCGCT GGTGATTCCG CCTGAGCATG CAGACCGTGG CCTGTATCTG GTCGACGGCG CCGTCACCAT CGACGGCGAG GCGCTCGACC CGCAGCACCT GGCCGTGCTG GAGCCCGGCG GCGACGTGAC GCTCACCGCG CAGGCATCGT CACGCGTGAT GCTGCTGGGC GGTGCCCCGA CCGATGGCCA CCGTCACATC TACTGGAACT TCGTCGCCAG CGACAAGGCC GACATTGAAG ACGCCAAGCA GCGCTGGGAG AGCGACGCCT TCGCTCACGT GCCCGGCGAA ACGGAGCGCA TTCCGCTGCC GTCCAAGTAA
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Protein sequence | MTSIQHIIGP HVRDLGGFSV KRVLPSAARQ TVGPFIFFDH MGPVNFAPGE GIDVRPHPHI GLATVTYLFD GSMVHRDSLG SVQTITPGDV NWMTAGNGIV HSERSSPEGR EKGARMHGIQ TWVALPKDQE KVNASFAHHA AETLPKLECP GVQGVVIAGD AFGLTSPVKV SSRTLYVALE LAAGASLVIP PEHADRGLYL VDGAVTIDGE ALDPQHLAVL EPGGDVTLTA QASSRVMLLG GAPTDGHRHI YWNFVASDKA DIEDAKQRWE SDAFAHVPGE TERIPLPSK
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