Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0230 |
Symbol | |
ID | 6289667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 243366 |
End bp | 244295 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623800 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_001897824 |
Protein GI | 187927337 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCAG TCATCCCCGT GAATACCGTT TCCGCAATCG CCACCCAGCC GTCCGGCAAC GCCGGTAATG GATGGGCACT GGCGTTCCCC GGCAACCTGG GCAACATCGA CGCCTATATC CAGAGCGTCA ACCGTGTGCC GATGTTGTCG GCCGAAGAAG AACAGCGTCT GGCCCGCGAA TACCGCGACA ACGACAACCT CGATGCCGCT CGCCGACTGG TGCTCTCGCA CCTGCGTCTG GTGGTGTCGA TCGCCCGCGG CTACCTCGGC TATGGCCTGC CGCATGCCGA CCTCATCCAG GAAGGCAACA TCGGCCTGAT GAAGGCCGTC AAGCGCTTCG ACCCGGATCA GGGCGTGCGT CTCGTCTCAT ACGCGATGCA CTGGATCAAG GCCGAGATGC ACGAGTACAT CCTGAAGAAC TGGCGCATGG TCAAGGTGGC CACCACCAAG GCCCAGCGCA AGCTGTTCTT CAACCTGCGC AGTCACAAGC AGGATGCGCA GGCGACCTTC ACGTCGGACG AGATCGACGC CGTGGCGGCC GAACTCAACG TCAAGGGCAC GGAAGTGCGC GAGATGGAAA CGCGCCTGTC CGGCGGCGAC ATTGCGCTGG AAGGCCAGAT GGACGACGGT GAGGAGTCGT TCGCTCCCAT CGCCTACCTG GCCGATACGC ACAACGAGCC GACCCGCGTG ATCGAAGCGC GTAGCAACGA CCGCATGCAA AGCGAGGGCA TCGAAGCCGC CCTCGCCAAG CTGGACGATC GCAGCCGCCG CATCATCGAA GCACGCTGGC TGAACGTGAA CGACGACGGA TCGGGCGGCT CGACGCTGCA CGAGTTGGCC GACGAGTTTG GCGTGTCGGC TGAGCGCATT CGCCAGATCG AATCGGCCGC GATGAAAAAG ATGAAGGGTG CGCTGCAGGC CTTCGCCTAA
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Protein sequence | MNAVIPVNTV SAIATQPSGN AGNGWALAFP GNLGNIDAYI QSVNRVPMLS AEEEQRLARE YRDNDNLDAA RRLVLSHLRL VVSIARGYLG YGLPHADLIQ EGNIGLMKAV KRFDPDQGVR LVSYAMHWIK AEMHEYILKN WRMVKVATTK AQRKLFFNLR SHKQDAQATF TSDEIDAVAA ELNVKGTEVR EMETRLSGGD IALEGQMDDG EESFAPIAYL ADTHNEPTRV IEARSNDRMQ SEGIEAALAK LDDRSRRIIE ARWLNVNDDG SGGSTLHELA DEFGVSAERI RQIESAAMKK MKGALQAFA
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