Gene Rpic_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0225 
Symbol 
ID6287028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp239088 
End bp239858 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID642623795 
Productputative transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein 
Protein accessionYP_001897819 
Protein GI187927332 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.566785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GCGTACCGAT GCGACGCTGG TTTGCGCCTG TGCCGATGTT GGCAGGTGTG 
GCACTGATCG CGCTCACGAG CTTGCTGGGG CGTTGGCAGC TGACGCGTGC GCACGAGCGC
ATCGAGCGCC AAGCCCGCAT TATGGCGCTG GAAAATGCGC CCGCCCAGCG CATCACAGCT
CAGCCGGTGA CAGCAGATTC AGTAATGTAC AGGCCGGTGC TGCTGCGTGG AACGTTCGAC
GTGGCGCACA CGGTGCTGCT CGAGAACCGC CCGCACGTCA CCAACGACGT ATCGCGCCCG
GGTTTCGAGG TGCTCATCCC GCTGATGCTG GAAGGTGCGG GCGGGCGCGC CGTGTTGGTC
GACCGGGGCT GGTTGCCGCG CGATCCGGCC GATCGCACGC GCATCGCGCC GTACACCACG
CCGGCGGGCG AAGTGCAGGT CGAAGGGATG GCGGTGCCGC ATGCCAGCCG AGTCTTCAGT
CTGGGCAGCA AGGACGGCGC TGATGAAGTT GGCCAGCGAC TTAGGCAGAA TATCGACCTC
GACGCTTTCT CGCGCGAAAT CGGCGTGCCG CTCCAACCCT TCGTGGTGCA GCAGCAGTCC
GACGTGGAGG ACGGCCTGTT GCGCGATTGG CCGCGCGCAG ACTTGGGCGC TGAGCGCAAT
TACGGTTACG CATTCCAATG GTTTGCGATG GCGGCGGCAG TGCTTGGGCT GATGGTCTTC
TACAGCGTGC GGCGTTATCG CCGCTTGGCA GGCACCTCCG AGCCTGCCTG A
 
Protein sequence
MTERVPMRRW FAPVPMLAGV ALIALTSLLG RWQLTRAHER IERQARIMAL ENAPAQRITA 
QPVTADSVMY RPVLLRGTFD VAHTVLLENR PHVTNDVSRP GFEVLIPLML EGAGGRAVLV
DRGWLPRDPA DRTRIAPYTT PAGEVQVEGM AVPHASRVFS LGSKDGADEV GQRLRQNIDL
DAFSREIGVP LQPFVVQQQS DVEDGLLRDW PRADLGAERN YGYAFQWFAM AAAVLGLMVF
YSVRRYRRLA GTSEPA