Gene Rpic_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0223 
Symbol 
ID6287026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp237823 
End bp238683 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content62% 
IMG OID642623793 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001897817 
Protein GI187927330 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.591162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGA ATCGAGCAAA CGCTCCGTAC TACTTCGTGC CCGGGCCCTC GCGGCATCCG 
ATTACGGCAA GCCTCGGCCT GCTGATCGTG CTGTTGAGCT CCGCTGCATG GGTGAATGCC
CAGCCGTGGG CCCCGTGGAC GTTCCTGGTC GGGCTGCTGT GGTTCCTCTT TGTGCTGCGC
GCGTGGTTTG CCGACGCCAT CTCCGAATCC GAGACCGGCA AGTACGGCGA CCGCGTGGAT
GCCTCGTTCC GCTGGTCGAT GAGCTGGTTC ATCTTCTCGG AAGTGATGTT CTTCGCGGCG
TTCTTCGGCG CGCTGTTCTA TGCCCGCACG ATCGCCATGC CGTGGCTGGG CGATCTGAAC
AACAAGCTGC TGTGGCCGGA CTTTAACGCG CTATGGCCGA ACGCTGGCCC CGCCGGCACG
GTATCACCGT TCACGACGAT GGGCCCGTGG CCGATCCCGA CCATCAACAC GGCGCTGCTG
CTGACCTCCG GTGTGACGCT CACGTGGGCA CATCATGCGC TGCGTGAAGG CAAGCGCGCG
CAGGTCATCC AGGGTCTGCT GCTGACGATC CTCCTGGGCT TTACGTTCAT GGGCTTCCAG
GCGTTCGAAT ACATCCACGC CTATCACGAA CTGAACCTGA AGCTGACCTC GGGCATCTAC
GGTTCGACGT TCTTCCTGCT GACGGGCTTC CACGGCTTCC ACGTGACCAT GGGCGCCATC
ATGCTGTCGG TGGTGCTGGG GCGTGTGATC AAGGGCCACT TCACGCCGGA GCATCACTTC
GCATTCGAAG GCGCCGCGTG GTACTGGCAC TTTGTGGACG TGGTGTGGCT GGGCCTGTAC
GTGGTGGTGT ACTGGCTGTA A
 
Protein sequence
MSANRANAPY YFVPGPSRHP ITASLGLLIV LLSSAAWVNA QPWAPWTFLV GLLWFLFVLR 
AWFADAISES ETGKYGDRVD ASFRWSMSWF IFSEVMFFAA FFGALFYART IAMPWLGDLN
NKLLWPDFNA LWPNAGPAGT VSPFTTMGPW PIPTINTALL LTSGVTLTWA HHALREGKRA
QVIQGLLLTI LLGFTFMGFQ AFEYIHAYHE LNLKLTSGIY GSTFFLLTGF HGFHVTMGAI
MLSVVLGRVI KGHFTPEHHF AFEGAAWYWH FVDVVWLGLY VVVYWL