| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0219 |
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| Symbol | |
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| ID | 6288668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 235070 |
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| End bp | 236674 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623789 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001897813 |
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| Protein GI | 187927326 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.886427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CTGTTACGCA CCCGCAAGAT CACGCGCACG GTCATGGAGA CGACCACGCG
CACGACCATC CGCACGGCTG GCGCCGTTGG CTGTTCGCGA CCAACCACAA GGACATCGGT
ACGCTGTATC TGCTGTTCTC TTTCATGATG CTGCTTTCAG GCGGCACGCT GGCCCTGCTG
ATCCGCCTTG AGCTGTTCCA GCCCGGCCTG CAGTTCTTCC ATCCGGAGCT GTTCAACCAG
TTCACCACCC TGCATGGCCT GATCATGGTG TTCGGCGCCA TCATGCCGGC CTTCGTGGGC
TTTGCGAACT GGATGATCCC GCTGCAGGTT GGCGCGTCCG ACATGGCGTT TGCGCGGATG
AACAACTTCA GCTTCTGGCT GCTGCCGCCT GCTGCGCTGC TGCTGGTGGG CTCGTTCTTC
GCCCCGGGCG GCGCCACCGC TGCCGGCTGG ACGCTCTACG CGCCGCTGTC GGTGCAGATG
GGCCCGGGCA TGGACATGGC GATCTTCGCG ATCCACATCA TGGGCGCATC GTCGATCATG
GGCGCGATCA ACATCATCGT GACCATCCTG AACATGCGCG CGCCGGGCAT GACGCTGATG
AAGATGCCGA TGTTCTGCTG GACGTGGCTG ATCACGGCGT ACCTGCTGAT CGCCGTGATG
CCGGTGCTGG CAGGCGCGAT CACCATGGTG CTGACCGACC GCCACTTCGG GACGAGCTTC
TTCTCGGCAG CCGGCGGCGG TGACCCGGTG ATGTACCAGC ACATCTTCTG GTTCTTCGGG
CACCCCGAGG TGTACATCAT GATCTTGCCG GCGTTCGGTA TCGTCAGCCA GATCGTGCCG
GCCTTTGCGC GCAAGCCGCT GTTCGGCTAC AGCTCGATGG TGTATGCCAC GGCGTCGATC
GCCATCCTGT CGTTCATCGT GTGGGCACAC CACATGTTCA CGACCGGTAT GCCCGTCACC
GGCCAGCTGT TCTTCATGTA CGCGACGATG CTGATTGCGG TGCCGACCGG CGTGAAGATC
TTCAACTGGG TGGCCACGAT GTGGCGCGGC TCGATGACGT TCGAGACGCC GATGCTGTTT
GCGATCGGCT TCATCTTCGT GTTCACGGTG GGCGGCTTCA CGGGCCTGAT CCTGGCCGTG
GCCCCGATCG ACATCCAGCT GCAGGACACC TACTACGTGG TGGCGCACTT CCACTACGTG
CTGGTGGCTG GTTCGCTGTT CGCGCTGTTC GCGGGCTTCT ACTACTGGGG CCCGAAGTGG
TCGGGCTACA TGTACAGCGA GACGCGCGGC AAGATCCACT TCTGGGGTTC GATGATCACG
TTCAACCTCA CGTTCTTCCC GATGCACTTC CTGGGCCTGG CAGGCATGCC GCGCCGCTAT
GCGGACTACC CGCAGCAGTT TGCCGATTTC AATGCGATCG CGTCGATCGG AGCTCTGGGC
TTCGGTCTGA TGCAAGTGTA TTTCTTCTTC TTCGTGGTGC TGCCGTCGTA CCGCGGTGGC
GAGAAGGCTG CCGACAAGCC TTGGGATGGC GCGGAAGGCC TGGAGTGGAC CGTGCCGTCG
CCGGCGCCGT TCCACACCTT TGAAGAACCG CCGCACGTGA AGTAA
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| Protein sequence | MSTAVTHPQD HAHGHGDDHA HDHPHGWRRW LFATNHKDIG TLYLLFSFMM LLSGGTLALL
IRLELFQPGL QFFHPELFNQ FTTLHGLIMV FGAIMPAFVG FANWMIPLQV GASDMAFARM
NNFSFWLLPP AALLLVGSFF APGGATAAGW TLYAPLSVQM GPGMDMAIFA IHIMGASSIM
GAINIIVTIL NMRAPGMTLM KMPMFCWTWL ITAYLLIAVM PVLAGAITMV LTDRHFGTSF
FSAAGGGDPV MYQHIFWFFG HPEVYIMILP AFGIVSQIVP AFARKPLFGY SSMVYATASI
AILSFIVWAH HMFTTGMPVT GQLFFMYATM LIAVPTGVKI FNWVATMWRG SMTFETPMLF
AIGFIFVFTV GGFTGLILAV APIDIQLQDT YYVVAHFHYV LVAGSLFALF AGFYYWGPKW
SGYMYSETRG KIHFWGSMIT FNLTFFPMHF LGLAGMPRRY ADYPQQFADF NAIASIGALG
FGLMQVYFFF FVVLPSYRGG EKAADKPWDG AEGLEWTVPS PAPFHTFEEP PHVK
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