Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0218 |
Symbol | |
ID | 6288667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 233773 |
End bp | 235029 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623788 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_001897812 |
Protein GI | 187927325 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.468069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.633646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGT TGAATAAGAC ATTGGCAAGT TTGCTGGCGG CAGGCTCCCT CCTCGCCCTC AGTCAAACGG CCCTGGCAGT GGAAGACATG CCAGGCGGCC CCGCAGTGCG GCAGCTTAAT CTCGCGCCTC CGGTCACCAA GATCGCCGCC GAGATCCATT GGCTGCACTG GATGATGCTG ATCATCTGTA TCGTGATCTT CATCGGTGTT TTCGGGGTGA TGTTCTACTC CATTTTCAAG CACCGTAAGT CGGTCGGTCA CAAACCGGCG ACGTTCCATG AAAGCACCAC GGTCGAAATC ATCTGGACCA TCGTGCCGTT CCTGATCGTG ATCGGGATGG CGCTGCCGGC CACCAAGGCC GTGGTCGCCA TGAAGGACAC CACCAACTCC GACCTCACCA TCAAGGCCAC CGGCTACCAG TGGAAGTGGG GTTACGACTA CCTGAAGGGC GAAGGCGAGG GCATCTCGTT CCTCTCCACG CTCACCACGC CGCGCGACCA GATCAACAAC CAGGCGCCCA AGTCGAACAC GTACCTGATC GAGGTCGACA ACGAGCTGGT CGTGCCGGTC AACCGCAAGG TGCGCATCGT CACGACCGCC AACGACGTGA TCCACTCGTG GATGATCCCG GCGTTCGGCG TGAAGCAGGA TGCGATTCCG GGCTTCGTGC GCGACGCATG GTTCAAGGCA GAGAAGGTCG GCGTCTATCG CGGCCAGTGC GCCGAGCTTT GCGGCAAGGA ACACGCCTTC ATGCCGATCG TCGTGCGCGT GCTCTCGCAG GACGACTACA CCAAGTGGGT CGACGGCAAG AAGAAGGAAA TGGCCGCCAA GGCCGATGAT CCGAACAAGA CCTACACGCT GGAAGAGCTG AAGTCGCGCG GCGAGAAGGT CTACACCGCC AACTGCGCGG TCTGCCACCA GCCGAACGGT AAGGGCGGTG GCCCGTTCCC GGCCCTTGAT GGCTCGAAGA TCGCCAATGG CCCGCTGGCC GACCACGTTG GCATCGTGCT GCACGGCAAG GGCGCGATGC CGCCCTGGGC TTCGGCGCTG AACGATGTCG AAATCGCTGC CGTCGTCACT TACGAGCGCA ACAACTGGGG TAACCATACC GGTGACCTGC TGCAGCCGAC GCAAGTGAAG GATGCGCGCG GCGGCAAGAT GCCCGAAGGT GGGGCTGCCA AGACCGCTAC AACTGAATCC GCCGGTAAGG TGGCGTCCAA ACAAGCGAAT GCGGCCGAAG ACCGCAACGC TGGCTGA
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Protein sequence | MKMLNKTLAS LLAAGSLLAL SQTALAVEDM PGGPAVRQLN LAPPVTKIAA EIHWLHWMML IICIVIFIGV FGVMFYSIFK HRKSVGHKPA TFHESTTVEI IWTIVPFLIV IGMALPATKA VVAMKDTTNS DLTIKATGYQ WKWGYDYLKG EGEGISFLST LTTPRDQINN QAPKSNTYLI EVDNELVVPV NRKVRIVTTA NDVIHSWMIP AFGVKQDAIP GFVRDAWFKA EKVGVYRGQC AELCGKEHAF MPIVVRVLSQ DDYTKWVDGK KKEMAAKADD PNKTYTLEEL KSRGEKVYTA NCAVCHQPNG KGGGPFPALD GSKIANGPLA DHVGIVLHGK GAMPPWASAL NDVEIAAVVT YERNNWGNHT GDLLQPTQVK DARGGKMPEG GAAKTATTES AGKVASKQAN AAEDRNAG
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