| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0213 |
|---|
| Symbol | gpsA |
|---|
| ID | 6288611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 229731 |
|---|
| End bp | 230762 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642623784 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001897808 |
|---|
| Protein GI | 187927321 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.182003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACA CGCGCATGCG AATTTCCGTT TTGGGTGCCG GTGCCTGGGG CACTGCCCTG
GCCAGCCACG CCGCGCAATC GCACGACGTC ATGCTGTGGG GGCGTGACGC GAACCTCGTC
GCGCAGATGG CCGCCACACA CATCAACGCG CCGTATTTGC CGGGCATGAC GCTGCGGGCG
TCGTTGCATT TTTCTGCTGA TCTGCAAGCC GCGCTCGACC ATGCGGCGGG CGACGACGCG
CTCGCCGTCA TCGCTTCACC TGTCGCCGGG CTGGCTGACC TGACCCGCAC GATTGCCGCG
CACGGCGGCG TGCGCAACGT GATCTGGCTG TGCAAGGGGT TCGACCCCGA AACCAGCGCA
CTGCCGCACG CCATCGTCGC CGATGTGCTG AAGGTGTCTG GCCGTACCGA CCTCGCTGTC
GGGGTGCTGT CGGGGCCGAG TTTCGCCAAG GAAGTCGCGC AGGGTTTGCC GTGCGCCATG
ACGGTCGCCT CGACCAGCGA TGCGCTGTGC AAGCTCACGC AGCGCGGTTT TCACCATCAC
GCGATGCGCG TGTATGCAAG CGATGACCTC GTCGGCGTGG AAGTGGGCGG TGCCGTTAAG
AACGTGCTCG CCATTGCGAC AGGCGCCGCC GACGGCCTGG GCCTCGGGCT GAACGCGCGC
GCCGCACTGG TCACGCGCGG GCTGGCCGAG ATGACGCGCC TGGGGTTGGC GCTCGGTGGT
CGGCTGGAAA CATTCATGGG GCTGACTGGC GTGGGCGATC TGCTGCTGAC CGCCACCGGC
GATCTGTCAC GCAACCGCAC GGTCGGGATG CAGCTTGCGC AGGGCCGCAC GCTCGACGAC
ATCCTGCACA GCCTCGGTCA CGTCGCCGAA GGCGTGCGTT GTGCGCGTGC CGTTGCGGCG
CTCGCGCGCG CCAAGGGCGT GGACATGCCG ATCACCTTTA CCGTCTGCGA AGTCCTGTTC
GAAGGGCTTC CTGCTGCGAA GGCGGTCGAG CGTCTGCTGC AGCGCGACGC CAAATCCGAA
TCGGCACGCT AG
|
|---|
| Protein sequence | MLNTRMRISV LGAGAWGTAL ASHAAQSHDV MLWGRDANLV AQMAATHINA PYLPGMTLRA
SLHFSADLQA ALDHAAGDDA LAVIASPVAG LADLTRTIAA HGGVRNVIWL CKGFDPETSA
LPHAIVADVL KVSGRTDLAV GVLSGPSFAK EVAQGLPCAM TVASTSDALC KLTQRGFHHH
AMRVYASDDL VGVEVGGAVK NVLAIATGAA DGLGLGLNAR AALVTRGLAE MTRLGLALGG
RLETFMGLTG VGDLLLTATG DLSRNRTVGM QLAQGRTLDD ILHSLGHVAE GVRCARAVAA
LARAKGVDMP ITFTVCEVLF EGLPAAKAVE RLLQRDAKSE SAR
|
|---|
| |