Gene Rpic_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0212 
Symbol 
ID6288610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp229120 
End bp229638 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID642623783 
Productpreprotein translocase subunit SecB 
Protein accessionYP_001897807 
Protein GI187927320 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.162983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC AGCAACAGCA GCAACCGGGC CAGGATGGCC AGCCGTTCTT CAACATCCAG 
CGCGTCTATC TGAAGGACCT GTCGCTGGAG CAACCGAACT CGCCGCACAT CTTCCTCGAG
CAGGAACAGC CGTCCGTGGA AGTGCAGGTC GACGTCGCCG CTTCGCAACT GGCTGAAGGC
GTGTTCGAAG TGACCGTCAT CGGTACCGTG ACGACCAAGG TGCAAGAGAA GGTGGCGTTC
CTGGTGGAAG CCAAGCAAGC TGGCATCTTC GATATCCGCA ACGTGCCGGC CGAACAGATG
GACCCGCTGC TGGGTATCGC CTGCCCGACC ATCGTGTACC CGTACCTGCG CTCGAACATT
GCCGACACCA TCGGCCGCGC CGGCTTCCAG CCGATCCACC TGGCCGAGAT CAACTTCCAG
GCGCTGTACG AACAACGCCT GGCCGCTGCC ATGGAGCAGC AAGGCCAAGC CGGTGGCACT
GGTCTGGTGA TGCCGGACGG CTCGAAGGCC ACCCACTAA
 
Protein sequence
MSDQQQQQPG QDGQPFFNIQ RVYLKDLSLE QPNSPHIFLE QEQPSVEVQV DVAASQLAEG 
VFEVTVIGTV TTKVQEKVAF LVEAKQAGIF DIRNVPAEQM DPLLGIACPT IVYPYLRSNI
ADTIGRAGFQ PIHLAEINFQ ALYEQRLAAA MEQQGQAGGT GLVMPDGSKA TH