Gene Rpic_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0202 
Symbol 
ID6287932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp221096 
End bp221551 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content64% 
IMG OID642623773 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001897797 
Protein GI187927310 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.262504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.29106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGA TTCTGATCAT CGCTCATGCG CCGCTGGCCA GCGCACTGCG CGATTGCGCT 
GCACACGTCT ATTGCGGACA GCCTGAAGGG CTGGGCGCAA TCGATGTCCT GCCCGATGCC
GAGCCGGCTG CCGTGCTGGC CCAGGCGCGC GACAAGCTCG CCGAACTCAT TGAAGCCAAC
GGCGCGCTGG TGCTGACCGA CATCTTCGGG GCCACGCCCG CCAATATCGC CTCGCGCCTG
GCTGATCCGG GCCGCGTGCG CGTGCTGGCC GGCGTGAACC TGCCGATGCT CGTGCGCGCC
ATCTGCTATC GCTCCGAAAA ACTCGAACAA CTTGCCGCCA AGGCCCTGGC CGGCGGCGCG
CAAGGCGTAC TGCAGGTCGG CTCGACAGCC GTTCAGAACC AGGTTGCCAA CCATCCGGAC
AAATATGCTG CAGAGGGATA TCACCATCAT CAATAA
 
Protein sequence
MAGILIIAHA PLASALRDCA AHVYCGQPEG LGAIDVLPDA EPAAVLAQAR DKLAELIEAN 
GALVLTDIFG ATPANIASRL ADPGRVRVLA GVNLPMLVRA ICYRSEKLEQ LAAKALAGGA
QGVLQVGSTA VQNQVANHPD KYAAEGYHHH Q