Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0188 |
Symbol | |
ID | 6289288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 207432 |
End bp | 208748 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642623759 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_001897783 |
Protein GI | 187927296 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG GCTTGAACGT TCTCTTCATC GAAGACGACC CGCCTGTGCG CCAGGCCACC GCGCAGAGCC TGGAACTGGC CGGCTTCAAT GTGCAGGCGT TCGGCAGCGC CGAAGAAGCC GTCGGCAAGA TCGACGCGAA CTTTCCCGGC GTGGTCGTGA GCGACCTGCG CCTGCCGGGC GCGAGCGGCC TGGACGTGCT CACGCACTGC CAGTCGTTTG GCACGGGCAT TCCCGTGGTG CTTGTCACCG GCCATGGCGA CATCACGATG GCCGTGCAGG CCATGCGCGA AGGCGCGTTC GACTTCATCG AGAAGCCGTT TCCCGCCGAA CGCTTGACCG AGACGGTGCG TCGCGCCGTC GAACGCCGCG CGCTGGAGTT GGAAAACCGC GCACTGCGTC GTGAACTGGC CGGCCCGGCG GCTGGCACGC GCATCATCGG GCGCTCACCA GCGATGGCCG CCGTACGCGC GCTGATCGAG AACGTCGCGA CCACCGATGC GCCGGTGCTC ATCAACGGCG AGACCGGCAC GGGCAAGGAA CTCGTCGCGC GCAGTCTGCA CATGCTCTCG CCGCGTCACG ACAAGCCGTT CATCGCGCTG AACTGCGGCG CCGTGCCTGA ACAGATTTTC GAGAGCGAGA TGTTCGGCTA CGAGGCCGGT GCCTTCACCG GTGCGGGCAA GCGGCGCATC GGCAAGCTTG AGCACGCATC GGGCGGCACG CTGTTTCTCG ACGAAATCGA GAGCATGCCG ATCGCGCTGC AGGTCAAGCT GCTGCGCGTG TTGCAGGAGG GCGCGCTGGA GCGGCTGGGC TCGAATGCTT CGGTGCGCAT CGACGTGCGC ATCGTTGCGG CCGCCAAGGG CGATATGGAA GCGCTGATCG AGGCGGGCGG TTTCCGGCGC GATCTGTACT ACCGCCTGAA TGTCGTCGTC ATCGACCTGC CACCGCTGCG CGAACGCCGC GAAGACATCA TCCCGCTGTT CGAACATTTC CTGCTCGAAG CCGCTGTGCG CTATCAGCGT CCGCTGCCGA TGCTGGCCGA GCGTCAGCGC CACGAGCTGA TGCAATCGAA CTGGCCCGGC AACGTGCGCG AGCTGCGTAA TGCGGCCGAC CGTCTTGTGC TTGGCGTCGG CCGCATGCCG GTCGTGCCGG ATGCTTCGGA AGACGGCATG CCGCTCAAGG AGCGCGTCGA GCGCTACGAG CGCACGGTGA TTGCCGAAAC ACTGGCGCGC ACGGGCGGCT CGGTCCACCA GGCGGCGGAC ATTCTGCAGG TCGGCCGTGC GACGCTGTAT GACAAGATCA AGCGGTACGG CCTTTGA
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Protein sequence | MSEGLNVLFI EDDPPVRQAT AQSLELAGFN VQAFGSAEEA VGKIDANFPG VVVSDLRLPG ASGLDVLTHC QSFGTGIPVV LVTGHGDITM AVQAMREGAF DFIEKPFPAE RLTETVRRAV ERRALELENR ALRRELAGPA AGTRIIGRSP AMAAVRALIE NVATTDAPVL INGETGTGKE LVARSLHMLS PRHDKPFIAL NCGAVPEQIF ESEMFGYEAG AFTGAGKRRI GKLEHASGGT LFLDEIESMP IALQVKLLRV LQEGALERLG SNASVRIDVR IVAAAKGDME ALIEAGGFRR DLYYRLNVVV IDLPPLRERR EDIIPLFEHF LLEAAVRYQR PLPMLAERQR HELMQSNWPG NVRELRNAAD RLVLGVGRMP VVPDASEDGM PLKERVERYE RTVIAETLAR TGGSVHQAAD ILQVGRATLY DKIKRYGL
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