Gene Rpic_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0186 
Symbol 
ID6289286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp203997 
End bp205286 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID642623757 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_001897781 
Protein GI187927294 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.436113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.912792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC CGTTCTACAA AATCCTGTAC GTACAGGTGC TGGCGGCCAT CGTCATCGGC 
GTTCTGCTGG GCCATTACTC GCCCGAACTC GCCGTCAAGA TGAAGCCGCT GGGCGATGGC
TTCATCCAAC TGATCAAGAT GGTGATCGGC CCGATCATCT TCTGTACTGT CGTCTCCGGC
ATTGCCGGCA TGCGCGACAT GAAGAAGGTG GGCCGCGTGG GCGGCAAGGC GTTGCTCTAC
TTCGAGGTCG TCTCGACCTT CGCGCTGATC ATCGGTCTCG CGGCGGGCCA CATCTTCAAC
CCCGGCGCGG GCTTTAACGT CGACGTCAAC ACCATCGATG CCAAGGCTGT GGCGCAGTAC
GCCGCCAAGG CGCACTCGGC CAGCACGGTC GACTTCCTGC TCAACATCAT CCCGAGCACG
GTGGTGGATG CCTTCGCCAA GGGCGACATC CTGCAGATCC TGCTGATCGC GCTGCTGTTT
GGGGGTGCAC TTTCTGCCAT GGGCGAGCGC GCGCAGATGG TGACGGACTT CATCGACCAG
ATCTCGCACG TGTTCTTCCG TATCGTGCAC GTCATCACGC GTGTGGCCCC GATCGGTGCC
TTTGGCGCCA TGGCTTTCAC CATCGGCAAA TACGGCGTGA TCTCGCTGGT GCCGCTGCTC
AAGCTGGTCG GCACGTTCTA CTTCACGGCG ATCATCTTTG TCGTGGTGGT GCTGGGCATC
ATCGCGCGGG TGGTCGGCTT CAACATCTTC CGCTTCGTTG CGTACATCAA GGAAGAACTG
CTAATCGTGC TCGGCACCAG CTCGTCGGAA TCGGCGCTGC CGCACCTGAT GGAAAAGATG
GAGAAGCTGG GCTGCTCGAA GTCGGTGGTG GGCCTGGTGG TTCCGACCGG TTACTCGTTC
AATCTGGACG GCACCAACAT CTACATGACG ATGGCGGTGA TCTTCATCTC GCAAGCACTG
AACATCGAGC TGACCTGGAC GCAGCAGCTG ACCATCCTGG CCGTTGCCAT GCTGACGTCG
AAGGGCGCAT CGGGCATCAC CGGTGCGGGC TTCATCACGC TGGCCGCAAC GCTGGCCGTG
GTGCCGGATA TTCCGGTGGC GGGCATGGTG CTGATTCTCG GTATCGACCG CTTCATGAGC
GAATGCCGTG CCCTGACCAA CATCACCGGC AACGGCGTGG CCTGCGTGGT GATCTCGGCC
TGGGAGCGTG AATTGGATCG CGCCAAACTG GCTCGCGTGC TGTCGGGCGA CCGCAGCGAC
GAGGGCGTGC CGGCCACCCC GGCAGTTTGA
 
Protein sequence
MKKPFYKILY VQVLAAIVIG VLLGHYSPEL AVKMKPLGDG FIQLIKMVIG PIIFCTVVSG 
IAGMRDMKKV GRVGGKALLY FEVVSTFALI IGLAAGHIFN PGAGFNVDVN TIDAKAVAQY
AAKAHSASTV DFLLNIIPST VVDAFAKGDI LQILLIALLF GGALSAMGER AQMVTDFIDQ
ISHVFFRIVH VITRVAPIGA FGAMAFTIGK YGVISLVPLL KLVGTFYFTA IIFVVVVLGI
IARVVGFNIF RFVAYIKEEL LIVLGTSSSE SALPHLMEKM EKLGCSKSVV GLVVPTGYSF
NLDGTNIYMT MAVIFISQAL NIELTWTQQL TILAVAMLTS KGASGITGAG FITLAATLAV
VPDIPVAGMV LILGIDRFMS ECRALTNITG NGVACVVISA WERELDRAKL ARVLSGDRSD
EGVPATPAV