Gene Rpic_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0184 
Symbol 
ID6287434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp202533 
End bp203180 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID642623755 
Productputative transmembrane protein 
Protein accessionYP_001897779 
Protein GI187927292 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.937664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC ATACCGAAGA ACGCCTAATT CCCGGCCCGG TCGGACAGAT CGACCTGTCG 
ATCGACCGGC CAGACACCGC GCCGCGCGGC TTGGCCCTCA TCGGCCATCC TCATCCGCTG
TTCGGCGGCA CCAAGGACAA CAAAGTCGCG CAGACGCTGG CACGCACCTT CGTCGGCCTC
GGCTATGTGA CGGTGCGCCT GAACTTCCGC GGCGTAGGCA AGACCGAGGG CACGCACGAC
AACGGCATCG GCGAGCAGGA CGACATGCTG GCCGTGCTCG ACTGGATGCG TACACAGACC
GAATGGTCCG CCGATGTGGC CACACTGCCG CTGGCACTGG GCGGCTTCTC CTTCGGCAGC
TTTGTCGTGT CTCAGGTGGC ACGCCGCCTG GCCGAGGCCG GCACACCTGC CGAACGCCTG
GCGCTGGTCG GCACCGCCAC CTCGCGCTGG GATGTCGCCC CGGTGCCGGC CGACACCATC
ATCATCCACG GCGAACAGGA TGACACCGTG CCGCTGATCG ACGTGCTCAA CTGGGCGCGG
CCGCAGGAGC TGCCCGTGAT CGTCATCCCG GGCGCCGATC ATTTCTTCCA CCGCAAGCTG
CATCTGATCC GGCAGCTCAT TACAGGCGCC TGGGCGCCAA AACCGTAA
 
Protein sequence
MNVHTEERLI PGPVGQIDLS IDRPDTAPRG LALIGHPHPL FGGTKDNKVA QTLARTFVGL 
GYVTVRLNFR GVGKTEGTHD NGIGEQDDML AVLDWMRTQT EWSADVATLP LALGGFSFGS
FVVSQVARRL AEAGTPAERL ALVGTATSRW DVAPVPADTI IIHGEQDDTV PLIDVLNWAR
PQELPVIVIP GADHFFHRKL HLIRQLITGA WAPKP