| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0181 |
|---|
| Symbol | |
|---|
| ID | 6289350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 199864 |
|---|
| End bp | 200826 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642623752 |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_001897776 |
|---|
| Protein GI | 187927289 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA TCCGCGAACC GATGCGCTTG CCGTCACTTG GCGCGCTGAG GGTGTTCGAG
GCGGCAGCCC GCTATGAGAG TTTTTCGCGT GCAGCGACGG AGCTGTTCGT TACGCACGGC
GCCGTCAGCC ATCAGATGCG CACGCTGGAA GACGAGCTGG GCGTGCCGTT GTTCGAGCGG
CGGGGCAAGC GCGTCATGCT CACGCACGCG GGCCGCGCCT ATGCCGATCG CGTGCGCGAG
GCGCTCGACC AGATCGCCCA GGCTACGCAC CAACTGCGCG CCGGTAACCG AGACAACCGC
CTGGCCATCA GCACGATGCC GTCGTTTGCG GCGCGCTGGC TGACGCCGCA TATCGGCACC
TTCATCGAGC GCCATCCCGA GTTGGAAGTG GAACTGTTCT CCAGCCCCGC GCTGGTCGAT
TTTGCGCGCG AAGAGGTGGA CGTGGCGCTG CGCATGGGTT CGGGCAACTA TCCGGGCCTG
TACGTGGAAA AGCTGCTCGA CGATGTGTTC TTCCCGATCT GCAGCCCGTC GTTCAACGGC
GGACGCCTGC CGCGCACGCT GGCCGAGATG GCAAGCATGA CCCTGCTGCG CAGCGAGGGC
GAGGCATGGA AACCGTGGTT CGATGCGGCC GGCCTTGAGG GGTTTGTGGA GCCGCGCGGG
GGGCTGATGT TCCAGGATTC ATCATTGCTG TTGCAGGCCG CGGCAGCGGG GCAGGGCATT
GCGCTGATCC GCCCGACGCT GGCGTTCAAC GAATTGCTGG CCGGCCGCGT GGTGCGCCTG
TTCGAGACGA CGATCCCCTG TCCGTGGAAC TACTACTTCG TCTGTCCACA CAGCGCGCTG
CAGACGCCCA AGATGCAGGC GTTCCGCACG TGGCTGCTGC CGGAGATTGC GGCGTTCAAG
CTCAAGCTGG CGGGGCTGAT GAACGACAAC GCGGTGTGCC TGGGGCACGT GTCCAAGGGC
TGA
|
|---|
| Protein sequence | MTEIREPMRL PSLGALRVFE AAARYESFSR AATELFVTHG AVSHQMRTLE DELGVPLFER
RGKRVMLTHA GRAYADRVRE ALDQIAQATH QLRAGNRDNR LAISTMPSFA ARWLTPHIGT
FIERHPELEV ELFSSPALVD FAREEVDVAL RMGSGNYPGL YVEKLLDDVF FPICSPSFNG
GRLPRTLAEM ASMTLLRSEG EAWKPWFDAA GLEGFVEPRG GLMFQDSSLL LQAAAAGQGI
ALIRPTLAFN ELLAGRVVRL FETTIPCPWN YYFVCPHSAL QTPKMQAFRT WLLPEIAAFK
LKLAGLMNDN AVCLGHVSKG
|
|---|
| |