| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0175 |
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| Symbol | |
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| ID | 6288869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 194325 |
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| End bp | 196427 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623746 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_001897770 |
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| Protein GI | 187927283 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCA ACAGTCGCCG TGGTTTTCTC CGATCCGCCG CCCAGTTGGC TGCTGCATCC
GCAGCCATGG GCGCGGTGCC CGAAGGCATT CGCCAGGCGC TGGCGATTCC CGCCCACAAC
GCGCACCGCA ATATCGAAGA TGTGCAGCAC ATCGTGATCC TCATGCAGGA AAACCGCTCG
TTCGATCATT ACTTCGGCAC GCTCCGTGGC GTGCGCGGGT ATGGCGATAC GCGTACCGTC
ACGCTGCCGA GCGGCAAGAG CGTGTGGCAT CAGCCGGTGG CCGGCGGCGC GGGCGAGGTG
CTGCCGTTCC GCCCGAGCGC GCCTGATCTC GGCCTGCAGT TCCTGCAAGA CTTGCCGCAC
GGCTGGAACG ACACGCACCT TGCCGTCAAC GGCGGGCGTT ACGATGGCTG GGTCCCACAC
AAGGGCACCA CGACGATGGC GTACCTGACG CGCCAGGACA TTCCGTTCCA CTATGCGCTG
GCCGACGCCT TCACCATCTG CGACGCCTAT CACTGCGCCA CGCCCACGTC GACCGACCCG
AACCGCTACT ACATGTGGAC AGGCTATGTC GGCAACGACA ACGTCGGCGG CGGCCCCGTG
ATCGACAACG CAGAAGCCGG CTACGGCTGG TCGACGTATC CGGAAGTGCT CGAAGCCGCC
GGCATCTCGT GGAAGATCTA CCAGGACATC GGTACGGGCC TGGACGCCGC AGGCTCATGG
GGCTGGACGA GCGACGCCTA CATCGGCAAC TACGGCGACA ACTCGCTGCT GTACTTCAAG
CAATATCAGA ACGCGCAGCC TGGCAACCCG CTGTACGACA AGGCGCGCAC CGGCACCAAC
GCAGCGGCCG GAGAGGGCTA CTTCGACATC CTCAAGCGCG ATGTGCAGAA CGGCACGCTG
CCGCAGGTGT CGTGGATTGC CGCGCCGGAA GCGTTCTCCG AGCATCCGAA CTGGCCGGCC
AACTACGGCG CGTGGTACAT CGACCAAGTC CTGCAGATCC TGACTTCCAA CCCCGAGGTG
TGGAGCAAGA CCGCGGTGTT CGTTACCTAC GACGAGAACG ACGGTTTCTT CGACCACCTC
GTCCCGCCGT TTGCCTCATC GGGCAGCAAT GGCCTGTCGA CGGTCGACAC CACGGGCGAG
TACTTTCCGG GCAACAGCAC GTACGGCGCC GGCAGCTACG GCCTGGGCCA GCGCGTGCCG
ATGCTCGTGG TATCGCCGTG GTCAAAGGGC GGCTACGTGT GCTCCGAAAC GTTCGACCAC
ACGTCGATCA TTCGTTTCAT CGAGCAGCGC TTCAAGCGCA CGCACAACGT GCGCTCGCCG
AACATCTCGA AGTGGCGTCG CGCCGTTTGC GGTGATCTGA CGTCGGCGTT CAACTTCGCC
ACCCCCAACG AGGTGGTGCC TGCATTGCCT AGCACCGCGG CCTACGTGCC GAAGGACAAG
CTGCGCCACG CCAGCTACGT GCCGCTGCCC CCGCTGGTGC AGGCCGTGCC GAAGCAGGAA
GCGGGCGTGC GAGCGTCGCG TGCGCTGCCG TACGAACTGT TCGTGCGCGG GCGCCAGGAC
GAAGCCGCCG GCAAGTTCCA GCTTGAATTC GTGAACACCG GGGACGTGGG GGCTGCCTTC
CTCGTCTACA CCGCCGGCAG CACGGATGCG CCGCGCACCT ACACGGTCGA GGCAGGCAAG
CGGCTGTCGG ACAAGCTGGC CGTGAACGCA GGCGGTGCCT ACGACTTCAC GGTGCACGGC
CCGAACGGCT TCCTGCGCCG CTTTGTCGGC AAGCTCACGC TGTCGGGCCT GCTGAGTCCG
CACGGTCACG CGCTGGAAGT GAAGGAAGGC TACGACGTGG CCAACGGCAA CCTGCAACTG
CGCCTCATCA ATCACGGCCG TGCGCCGACC GTCTTCACCA TCAAGAGCGC TTACACGGGC
GAAAGCGTGC AACGCGAAGT GCGCGGCGGT GACGATGCGT CGGTGTACCT CGACTTGCGC
AGCCACCACG CCTGGTACGA CCTGACCGTC ACGGCCAGCA CCGATGCCGG TTTCGCGCGT
CGCCTTGCCG GCCACGTTGA AACCGGCCGC GTCAGCGCGT CCGATCCAGC GCTGAGCGCA
TAA
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| Protein sequence | MTSNSRRGFL RSAAQLAAAS AAMGAVPEGI RQALAIPAHN AHRNIEDVQH IVILMQENRS
FDHYFGTLRG VRGYGDTRTV TLPSGKSVWH QPVAGGAGEV LPFRPSAPDL GLQFLQDLPH
GWNDTHLAVN GGRYDGWVPH KGTTTMAYLT RQDIPFHYAL ADAFTICDAY HCATPTSTDP
NRYYMWTGYV GNDNVGGGPV IDNAEAGYGW STYPEVLEAA GISWKIYQDI GTGLDAAGSW
GWTSDAYIGN YGDNSLLYFK QYQNAQPGNP LYDKARTGTN AAAGEGYFDI LKRDVQNGTL
PQVSWIAAPE AFSEHPNWPA NYGAWYIDQV LQILTSNPEV WSKTAVFVTY DENDGFFDHL
VPPFASSGSN GLSTVDTTGE YFPGNSTYGA GSYGLGQRVP MLVVSPWSKG GYVCSETFDH
TSIIRFIEQR FKRTHNVRSP NISKWRRAVC GDLTSAFNFA TPNEVVPALP STAAYVPKDK
LRHASYVPLP PLVQAVPKQE AGVRASRALP YELFVRGRQD EAAGKFQLEF VNTGDVGAAF
LVYTAGSTDA PRTYTVEAGK RLSDKLAVNA GGAYDFTVHG PNGFLRRFVG KLTLSGLLSP
HGHALEVKEG YDVANGNLQL RLINHGRAPT VFTIKSAYTG ESVQREVRGG DDASVYLDLR
SHHAWYDLTV TASTDAGFAR RLAGHVETGR VSASDPALSA
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