Gene Rpic_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0174 
Symbol 
ID6288868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp191749 
End bp193716 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content68% 
IMG OID642623745 
ProductIucA/IucC family protein 
Protein accessionYP_001897769 
Protein GI187927282 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACGTC GATCTGATAC CGCCGCCCAC ACCGAAACCG CATCCGCTGC CGCTGCAGCC 
GGCAACCTCC GTCTTGAATC CATTCCCGCG CTGCGCGATG CCGGCGTGCA GACCGAACAT
TGGTCGGCGG CGCAGCAGTT GGCACGCTGC CGGGTGCTGT CGCGCCTGCT GCAGGCGCTG
TTTCGTGAAG CGCTGCTCAG CGCAGATCGA CTCATCGCCG ATACGCGCGC CGATGTGACG
TTGCTGCCGA TCTGGCAGCA GCGCGTGCTG TTACGCTTCA CTGGCTTGCG GCCGGGCGCA
CTCGGCAGCT GGACATTGAC GGGCGACGTC GCTGTGCTGG CGCACGATCG CCCGCCGACG
CCGATTGAAC GTCCATCAGC CCTGCTCCAC TGGCTCGCGC CCATGCTGGA CATGGGCGAT
GCCGCCGAGG CCCATCGCCT CGCCGCCATC GACCGGCTCG CGGCAGAACT CGACAACAGC
CAGGACAACG ACACGCTGTG CCAGGCCTAT CGACTCGCCT GGGGCGCACG TCTCGCTGCC
GAGCACCGCA CCGCCGCGTG GCAAGACGCG CTGGCCCTGC TCTGCGGCGA CGGCACGCCC
CACGCCTTGG CGCGCACCGA GCAATGGGGC ACCGGCGGCC ACCCGTGGCA TCCGGCCTAC
AAGACACGGC TGGGACTGGC TCCCGACCAG GTGATTGCGC TGTCGCCAGA GTTCGAGGCA
CAGGTGCCCC TCGGCGTGGT GGCGGTGGCG GCGCATCGAC TGCAGGTCAC GACGATGGAC
GGTGTGCAGC CGTACGCCAA TTGGTTCGCG GCGGCGTTCC CGCAAACCAT GGCGGCGTTT
CGCAAAGCCC TGTTGGCACG CCAGCTCGCG CCCGAAGCGT GGCTGCCGCT GCCCGTTCAC
CCGTGGCAGC GCGACACGAC ACTCGGTGAG ACCTTCGCCG CAGAATTTGC CGCAGGCGAA
TTGATCCGTT TGCCGGACAT CAACATTGCC GCCCGGCCAA CGATGTCATT CCGCACCGTG
GCCGCGACCG ACGCGCCGGG CGGCGCGATG CTCAAGCTGC CGGTCAGCAT GCGGCTGACC
AGCGTTGAGC GCACCGTATC GCCCAAATCG GCCGTGATGG GCCCGCGCGT GAGTGCGCTG
CTGGAACGCA TCCTCGCGAA CGACGCAGCA TTGGCGAGCG TCTTGTCGAT CGTGCCGGAA
CGCCATGGCA TCCACTTGGC CGGCACCGAC GACGAGCGCG CCCGGCATCT GTCGATGATC
GTGCGCGACA ACCCCACCAC GCGCATCGCC GGCAACGCGC GGCTGCTGCC GGTCGGTGCC
CTCTTCACAC CGGATTTCAC CGCCGACATG ACGCACGCAG CAGCACCGCT GCTGCTCGAC
ACCGTGCTGG CGCGCCAGGC CGACGGCACG CGCGCCGAGC GGGCTGCGCG CTTTTTCGAT
GCGTACCTGC ACGTAGCCAT TCCGGCCATC GTCGGCCTCT ATTTGCGTTA CGGCATTGCG
TTGGAGGCGC ATCAGCAGAA CACCTTCGTC GTCATCGACG AGGCCGGTAT GCCGGTGCGG
CTGGTGGTGC GTGACTTTGG CGACGTGAAG ATCGCCCTGC CGACGCTGCA GGCCCAAGGC
TTCTCGATCG AGCCGTTCCG TGCAGGCCAC ACCACGTATC CCGATCGGGA CATCCCGCGC
AAGAAGCTGA TCCACGCCTT CCTGCTGTGC CATATCGGTG AGCTGGCGCT GGCGCTGTTT
CCCGAACACG GTAGCGCCGT CGGGCTACGC CAGTGGCATG ACGCCATGCA GGCCGTGTTC
GAGGCAAACC GCACGGCGCT GGATGCCGAC ACCTGGAAGC AGGAGCGTCA CGCGCTGCTC
GAAGCGCCAT GGTCGTTCAA GACGTTCGTT CGCATGCGCC TGCGCGACCA GTCCGACGAC
ATGCACGCCG CGCTGCCTAA CCCGCTGGCC GACGCGGTTC GGACATGA
 
Protein sequence
MQRRSDTAAH TETASAAAAA GNLRLESIPA LRDAGVQTEH WSAAQQLARC RVLSRLLQAL 
FREALLSADR LIADTRADVT LLPIWQQRVL LRFTGLRPGA LGSWTLTGDV AVLAHDRPPT
PIERPSALLH WLAPMLDMGD AAEAHRLAAI DRLAAELDNS QDNDTLCQAY RLAWGARLAA
EHRTAAWQDA LALLCGDGTP HALARTEQWG TGGHPWHPAY KTRLGLAPDQ VIALSPEFEA
QVPLGVVAVA AHRLQVTTMD GVQPYANWFA AAFPQTMAAF RKALLARQLA PEAWLPLPVH
PWQRDTTLGE TFAAEFAAGE LIRLPDINIA ARPTMSFRTV AATDAPGGAM LKLPVSMRLT
SVERTVSPKS AVMGPRVSAL LERILANDAA LASVLSIVPE RHGIHLAGTD DERARHLSMI
VRDNPTTRIA GNARLLPVGA LFTPDFTADM THAAAPLLLD TVLARQADGT RAERAARFFD
AYLHVAIPAI VGLYLRYGIA LEAHQQNTFV VIDEAGMPVR LVVRDFGDVK IALPTLQAQG
FSIEPFRAGH TTYPDRDIPR KKLIHAFLLC HIGELALALF PEHGSAVGLR QWHDAMQAVF
EANRTALDAD TWKQERHALL EAPWSFKTFV RMRLRDQSDD MHAALPNPLA DAVRT