Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0174 |
Symbol | |
ID | 6288868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 191749 |
End bp | 193716 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642623745 |
Product | IucA/IucC family protein |
Protein accession | YP_001897769 |
Protein GI | 187927282 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACGTC GATCTGATAC CGCCGCCCAC ACCGAAACCG CATCCGCTGC CGCTGCAGCC GGCAACCTCC GTCTTGAATC CATTCCCGCG CTGCGCGATG CCGGCGTGCA GACCGAACAT TGGTCGGCGG CGCAGCAGTT GGCACGCTGC CGGGTGCTGT CGCGCCTGCT GCAGGCGCTG TTTCGTGAAG CGCTGCTCAG CGCAGATCGA CTCATCGCCG ATACGCGCGC CGATGTGACG TTGCTGCCGA TCTGGCAGCA GCGCGTGCTG TTACGCTTCA CTGGCTTGCG GCCGGGCGCA CTCGGCAGCT GGACATTGAC GGGCGACGTC GCTGTGCTGG CGCACGATCG CCCGCCGACG CCGATTGAAC GTCCATCAGC CCTGCTCCAC TGGCTCGCGC CCATGCTGGA CATGGGCGAT GCCGCCGAGG CCCATCGCCT CGCCGCCATC GACCGGCTCG CGGCAGAACT CGACAACAGC CAGGACAACG ACACGCTGTG CCAGGCCTAT CGACTCGCCT GGGGCGCACG TCTCGCTGCC GAGCACCGCA CCGCCGCGTG GCAAGACGCG CTGGCCCTGC TCTGCGGCGA CGGCACGCCC CACGCCTTGG CGCGCACCGA GCAATGGGGC ACCGGCGGCC ACCCGTGGCA TCCGGCCTAC AAGACACGGC TGGGACTGGC TCCCGACCAG GTGATTGCGC TGTCGCCAGA GTTCGAGGCA CAGGTGCCCC TCGGCGTGGT GGCGGTGGCG GCGCATCGAC TGCAGGTCAC GACGATGGAC GGTGTGCAGC CGTACGCCAA TTGGTTCGCG GCGGCGTTCC CGCAAACCAT GGCGGCGTTT CGCAAAGCCC TGTTGGCACG CCAGCTCGCG CCCGAAGCGT GGCTGCCGCT GCCCGTTCAC CCGTGGCAGC GCGACACGAC ACTCGGTGAG ACCTTCGCCG CAGAATTTGC CGCAGGCGAA TTGATCCGTT TGCCGGACAT CAACATTGCC GCCCGGCCAA CGATGTCATT CCGCACCGTG GCCGCGACCG ACGCGCCGGG CGGCGCGATG CTCAAGCTGC CGGTCAGCAT GCGGCTGACC AGCGTTGAGC GCACCGTATC GCCCAAATCG GCCGTGATGG GCCCGCGCGT GAGTGCGCTG CTGGAACGCA TCCTCGCGAA CGACGCAGCA TTGGCGAGCG TCTTGTCGAT CGTGCCGGAA CGCCATGGCA TCCACTTGGC CGGCACCGAC GACGAGCGCG CCCGGCATCT GTCGATGATC GTGCGCGACA ACCCCACCAC GCGCATCGCC GGCAACGCGC GGCTGCTGCC GGTCGGTGCC CTCTTCACAC CGGATTTCAC CGCCGACATG ACGCACGCAG CAGCACCGCT GCTGCTCGAC ACCGTGCTGG CGCGCCAGGC CGACGGCACG CGCGCCGAGC GGGCTGCGCG CTTTTTCGAT GCGTACCTGC ACGTAGCCAT TCCGGCCATC GTCGGCCTCT ATTTGCGTTA CGGCATTGCG TTGGAGGCGC ATCAGCAGAA CACCTTCGTC GTCATCGACG AGGCCGGTAT GCCGGTGCGG CTGGTGGTGC GTGACTTTGG CGACGTGAAG ATCGCCCTGC CGACGCTGCA GGCCCAAGGC TTCTCGATCG AGCCGTTCCG TGCAGGCCAC ACCACGTATC CCGATCGGGA CATCCCGCGC AAGAAGCTGA TCCACGCCTT CCTGCTGTGC CATATCGGTG AGCTGGCGCT GGCGCTGTTT CCCGAACACG GTAGCGCCGT CGGGCTACGC CAGTGGCATG ACGCCATGCA GGCCGTGTTC GAGGCAAACC GCACGGCGCT GGATGCCGAC ACCTGGAAGC AGGAGCGTCA CGCGCTGCTC GAAGCGCCAT GGTCGTTCAA GACGTTCGTT CGCATGCGCC TGCGCGACCA GTCCGACGAC ATGCACGCCG CGCTGCCTAA CCCGCTGGCC GACGCGGTTC GGACATGA
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Protein sequence | MQRRSDTAAH TETASAAAAA GNLRLESIPA LRDAGVQTEH WSAAQQLARC RVLSRLLQAL FREALLSADR LIADTRADVT LLPIWQQRVL LRFTGLRPGA LGSWTLTGDV AVLAHDRPPT PIERPSALLH WLAPMLDMGD AAEAHRLAAI DRLAAELDNS QDNDTLCQAY RLAWGARLAA EHRTAAWQDA LALLCGDGTP HALARTEQWG TGGHPWHPAY KTRLGLAPDQ VIALSPEFEA QVPLGVVAVA AHRLQVTTMD GVQPYANWFA AAFPQTMAAF RKALLARQLA PEAWLPLPVH PWQRDTTLGE TFAAEFAAGE LIRLPDINIA ARPTMSFRTV AATDAPGGAM LKLPVSMRLT SVERTVSPKS AVMGPRVSAL LERILANDAA LASVLSIVPE RHGIHLAGTD DERARHLSMI VRDNPTTRIA GNARLLPVGA LFTPDFTADM THAAAPLLLD TVLARQADGT RAERAARFFD AYLHVAIPAI VGLYLRYGIA LEAHQQNTFV VIDEAGMPVR LVVRDFGDVK IALPTLQAQG FSIEPFRAGH TTYPDRDIPR KKLIHAFLLC HIGELALALF PEHGSAVGLR QWHDAMQAVF EANRTALDAD TWKQERHALL EAPWSFKTFV RMRLRDQSDD MHAALPNPLA DAVRT
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