Gene Rpic_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0162 
Symbol 
ID6289810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp180211 
End bp180906 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID642623733 
Productglutathione peroxidase 
Protein accessionYP_001897757 
Protein GI187927270 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.520461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTC CCGCCACCGT TTCCATGCGT CGCCCGCGCC TGCAATTGCA CGCGTCGGGT 
GTGCTGCGTC GGCACCATCT GCTGATGATC GCCATTGCGA TTGCCATTGC CGTCATCGCG
TTGCTGCTGC CGCGCACGGG GCATGCTGTT ACGGCCGGCG TCGCACCGGC TGCACAAACC
CCGACCACCC CGGGCGCCTG CCCCGCGAGC CTGAATTTTC GCGTCAAGCG CCTGCAGGAC
GATGCGCCGC AAGACCTTTG CCAGTACGCC GGCCGCGTCG TGCTGGTGGT CAACACCGCC
AGCTATTGCG GCTACACGCA TCAGTACGAA GGGCTCGAAG CGCTGTACGC AAAGTATCGC
GACAAGGGAC TGACGGTGCT GGGCTTTCCG TCCAATGACT TTCAGCAGGA ACCCGGCAAC
AGCAAGCAGA TCGCCGACTT TTGCTACAAC ACGTACGGCG TGAAATTCCC GATGTTCTCG
AAGACGGCAG TGGTGGGTGC GGGCGCATCG CCGCTGTATG CGTGGCTCGC GACGCAGACG
GGCCAGCCGC CCAAGTGGAA CTTCCACAAA TACCTGCTGG ACCGCACCGG CCGCGTGGCG
GCAGTGTTCC CCAGCAGTGT CGAGCCGAGC GACCCAGCGC TCATCAAACG CATCGACGCA
CTGCTGGCTG AACCATCGAC CCGCTCGTCC CGCTGA
 
Protein sequence
MLFPATVSMR RPRLQLHASG VLRRHHLLMI AIAIAIAVIA LLLPRTGHAV TAGVAPAAQT 
PTTPGACPAS LNFRVKRLQD DAPQDLCQYA GRVVLVVNTA SYCGYTHQYE GLEALYAKYR
DKGLTVLGFP SNDFQQEPGN SKQIADFCYN TYGVKFPMFS KTAVVGAGAS PLYAWLATQT
GQPPKWNFHK YLLDRTGRVA AVFPSSVEPS DPALIKRIDA LLAEPSTRSS R