Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0155 |
Symbol | |
ID | 6289305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 172908 |
End bp | 173900 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623726 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001897750 |
Protein GI | 187927263 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.757644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCG CCACCCTCAA GGATGGCTCG CGCGACGGCC AGTTGGCCGT GGTCTCGCGC GACCTCAAGA CCGCTCACTT CGCCACGCAC ATCGCCGGCA CGCTGCAGCG CGCGCTGGAC GACTGGGCCT TCCACGCGCC GCAGCTGCAG GATCTGTACG ACCAGCTCAA CGCGGGCCGC GCACGCCACC CGTTTGCGTT CGATGCCGCC AACTGCATGG CGCCGCTGCC GCGCGCTTAC CAGTGGGCGG ATGGCTCGGC GTATTTGAAT CACGTTGAAC TGGTGCGCAA GGCGCGCGGC GCCGAGATGC CCCCCGAGTT CTGGACCGAC CCGCTGATGT ACCAGGGCGG CTCGGACGAC CTAGCCGGCG CGCACGATCC CATCGTCTGC CGCAGCGAGG CGTTCGGCAT CGATTTCGAA GCCGAGGTGG CTGTCATCAC CGGCGACGTG CCGATGGGCA CCGAGGCGGC CGCCGCTGCC GAGGGCATCC GCCTGATCGT GCTGGCCAAC GATGTGTCGC TGCGCAATCT GATTCCGGCG GAGCTGGGCA AGGGTTTCGG CTTCTTCCAG AGCAAGCCGG CCACGTCGTT CTCGCCCGTC GCCGTCACGC CCGATGAATT GGGCGACGCC TGGCGCGAAC GCAAGGTACA TCTGCCGATG ACGGTGCGCT GGAACAACAA GAAGGTCGGC CAGCCCGAGT GCGGCACCGA TATGGTGTTC GACTTCGGTC AGCTGATCGC GCACATCTGC AAAACACGCA ACGTGCGTGC GGGCAGCATC GTTGGCTCGG GCACGATTTC CAACGTGGAC CGCAGCAAGG GGTACGCGTG CATTGCCGAG AAACGCATGC TGGAAACCAT CGAATCCGGT GCGCCCATCA CCGAATACAT GCGCTACGGC GACACCGTGA AGATCGAGAT GTTCGACGCC AACGGCGTGT CGATTTTCGG GGCGATCGAC CAGGAAGTTG TCGCGCCGGG CACGCAGGCG TAA
|
Protein sequence | MKLATLKDGS RDGQLAVVSR DLKTAHFATH IAGTLQRALD DWAFHAPQLQ DLYDQLNAGR ARHPFAFDAA NCMAPLPRAY QWADGSAYLN HVELVRKARG AEMPPEFWTD PLMYQGGSDD LAGAHDPIVC RSEAFGIDFE AEVAVITGDV PMGTEAAAAA EGIRLIVLAN DVSLRNLIPA ELGKGFGFFQ SKPATSFSPV AVTPDELGDA WRERKVHLPM TVRWNNKKVG QPECGTDMVF DFGQLIAHIC KTRNVRAGSI VGSGTISNVD RSKGYACIAE KRMLETIESG APITEYMRYG DTVKIEMFDA NGVSIFGAID QEVVAPGTQA
|
| |