Gene Rpic_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0155 
Symbol 
ID6289305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp172908 
End bp173900 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID642623726 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001897750 
Protein GI187927263 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.757644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CCACCCTCAA GGATGGCTCG CGCGACGGCC AGTTGGCCGT GGTCTCGCGC 
GACCTCAAGA CCGCTCACTT CGCCACGCAC ATCGCCGGCA CGCTGCAGCG CGCGCTGGAC
GACTGGGCCT TCCACGCGCC GCAGCTGCAG GATCTGTACG ACCAGCTCAA CGCGGGCCGC
GCACGCCACC CGTTTGCGTT CGATGCCGCC AACTGCATGG CGCCGCTGCC GCGCGCTTAC
CAGTGGGCGG ATGGCTCGGC GTATTTGAAT CACGTTGAAC TGGTGCGCAA GGCGCGCGGC
GCCGAGATGC CCCCCGAGTT CTGGACCGAC CCGCTGATGT ACCAGGGCGG CTCGGACGAC
CTAGCCGGCG CGCACGATCC CATCGTCTGC CGCAGCGAGG CGTTCGGCAT CGATTTCGAA
GCCGAGGTGG CTGTCATCAC CGGCGACGTG CCGATGGGCA CCGAGGCGGC CGCCGCTGCC
GAGGGCATCC GCCTGATCGT GCTGGCCAAC GATGTGTCGC TGCGCAATCT GATTCCGGCG
GAGCTGGGCA AGGGTTTCGG CTTCTTCCAG AGCAAGCCGG CCACGTCGTT CTCGCCCGTC
GCCGTCACGC CCGATGAATT GGGCGACGCC TGGCGCGAAC GCAAGGTACA TCTGCCGATG
ACGGTGCGCT GGAACAACAA GAAGGTCGGC CAGCCCGAGT GCGGCACCGA TATGGTGTTC
GACTTCGGTC AGCTGATCGC GCACATCTGC AAAACACGCA ACGTGCGTGC GGGCAGCATC
GTTGGCTCGG GCACGATTTC CAACGTGGAC CGCAGCAAGG GGTACGCGTG CATTGCCGAG
AAACGCATGC TGGAAACCAT CGAATCCGGT GCGCCCATCA CCGAATACAT GCGCTACGGC
GACACCGTGA AGATCGAGAT GTTCGACGCC AACGGCGTGT CGATTTTCGG GGCGATCGAC
CAGGAAGTTG TCGCGCCGGG CACGCAGGCG TAA
 
Protein sequence
MKLATLKDGS RDGQLAVVSR DLKTAHFATH IAGTLQRALD DWAFHAPQLQ DLYDQLNAGR 
ARHPFAFDAA NCMAPLPRAY QWADGSAYLN HVELVRKARG AEMPPEFWTD PLMYQGGSDD
LAGAHDPIVC RSEAFGIDFE AEVAVITGDV PMGTEAAAAA EGIRLIVLAN DVSLRNLIPA
ELGKGFGFFQ SKPATSFSPV AVTPDELGDA WRERKVHLPM TVRWNNKKVG QPECGTDMVF
DFGQLIAHIC KTRNVRAGSI VGSGTISNVD RSKGYACIAE KRMLETIESG APITEYMRYG
DTVKIEMFDA NGVSIFGAID QEVVAPGTQA