| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0152 |
|---|
| Symbol | |
|---|
| ID | 6287139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 170010 |
|---|
| End bp | 170849 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642623723 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001897747 |
|---|
| Protein GI | 187927260 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.632153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCA ACGCCCTCTC CGATTCCGGC ACGGTGCACG CCAACCACAT CGACATCCAC
CACCGCACCG AGGGCGCCGA TGGCCCGTGG GTCGTGCTTG CGCACGCCTT GGGCGTAGAC
CACCAATTGT GGGACAGCGC CGCCCGACGC CTGGCCAGCC GCTATCGCGT GCTGCGCTAC
GACGCACGTG GCCACGGCAA GACCAGCGCC CCGCACGGCC CCTACACGCT GTTCCAGATG
GCGGACGATG TGGCCGGCCT GCTCGATGCG CTATCGATCG GACAGGTGCA TTTCGTTGGC
CTGTCGATGG GCGGCATGGT CGGGCAGGTC CTGGGCGTGC GGCACGCGCA GCGGCTGCTC
TCGCTGACGC TGTGCGACAC CGTGTGCTAC ACGCCGGCGT CAGCGCATGT CATGTGGGAC
GAGCGCATCG GTCAAGTCGA AGCGCACGGT ATGAGCGGCA TTGTCGAGCC CACGATACAG
CGCTGGCTGA CCACGCCGTT TCGTGAAGCC CATCCCGACG TCGTTGAACG CATCCGCGGC
TTGCTGCGCG CCACACAACC GCACGGCTAT GTCGGTACAT GCCTGGCCAT CAAGGCGCTC
GACACACGCA GCGCGCTGGC GCGCATCGCC TGTCCCACGC TCGTCATGAC AGGCGACCAA
GACACCGGTG CCCCGGTGGA AGCGGCACGC GAGATCGCCA CGCACATTCC TGACGCCCGT
TTGAAAGTGA TTCCGCACGC GGCGCACCTG GCCCCCATCG AACAGGAGGA GGGCTTCCTC
GCCGATCTGG ATGAGTTCCT CGGGCACGCA GGATGCGGGA GTCAATGCGA CACGCCATAA
|
|---|
| Protein sequence | MDTNALSDSG TVHANHIDIH HRTEGADGPW VVLAHALGVD HQLWDSAARR LASRYRVLRY
DARGHGKTSA PHGPYTLFQM ADDVAGLLDA LSIGQVHFVG LSMGGMVGQV LGVRHAQRLL
SLTLCDTVCY TPASAHVMWD ERIGQVEAHG MSGIVEPTIQ RWLTTPFREA HPDVVERIRG
LLRATQPHGY VGTCLAIKAL DTRSALARIA CPTLVMTGDQ DTGAPVEAAR EIATHIPDAR
LKVIPHAAHL APIEQEEGFL ADLDEFLGHA GCGSQCDTP
|
|---|
| |