Gene Rpic_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0142 
Symbol 
ID6288354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp160751 
End bp162208 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content64% 
IMG OID642623713 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001897737 
Protein GI187927250 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.843077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGC ATGCCATGCG GTCATCCTTG CGCTCCACTC TGCTGCTCGC CGGCGGCATT 
CTGCTGACGC TCGGGGTGCT GATTGCCTCG GAGACGGGCA ACATCCGCCT GAGCCAGGGC
TATCGGCAGG TGATTCAGTC GCAGCAGGCT GAAACCGCCA TCAACGAACT GCTTGCCGAG
CTGGTGAACG CCGAGGCGGG GCAACGCGGG TTCCTGCTCA CGGGCAAGGA CGAATACCTC
GATCCATACA ACAAGGCCAT CCCGCACATC CACGCGTTGA TGGCAGAAAT TCGCGATCAC
TACGCCAACG ATCCTGACGC GCTGAAGCTG TTCTCGGAGA CGGCGCTCCA GGTGAGCCGC
AAGCTCACCG AGATGGAACT CACGCTCATT TACGGCAAGC GTGATCTGGA AGTGGCGCTC
GATCTCGTGC GCACCGATTT CGGCAAGGCA TCGATGGAAG CGGTGCGGCA GGGGCTGGAC
CGCCTGCGTC AGCGTGAGAT CGCCACCGTG GCCCGCAGCC TTGAACACGC CGAGCGCGAT
CTGGCGCTCT CGCGCTACGG CATTGCGCTC ATCACGGCGG TCAACATCAT CCTGCTGGTG
GTACTGGGCA TGCAGCACGC CAAGCGCCTT GCCGTGACGG AGCGTGAGCG CGACATGGCG
GAGGAGGAAA GCCAGAAGCT CGACCGTATG GTGCGTGAGC GCACGCGTCA GTTGTCCGAC
TTGGCTGCGC ACTTGCAGCG TGTGACCGAA GATGAGAAGA CGCGCCTCGC GCGCGAGCTG
CACGACGAGC TGGGCGCCAT CCTCACCGCC ACCAAGATGG ACCTCCACTG GCTGCGTTCA
CGCATTCATG CCAATGAGCC TGCGGTAAGC GAAAAGATCA CGCGCGTGAT GGCCCACGTG
GATCAGGGCA TCCAGATCAA GCGCCGCCTG ATCGAAGACC TGCGCCCGAC GATCCTGCTC
AACCTGGGTT TGGTGGAAGC GCTCTCGCAA TTGACGGAGG ACGTGGGCAC GCGCAATGGC
TGGCATACGG AAGTGAGCCT GCCCGACGAT ATGCCCAAGC TGACCGACGA TGCGGCCATC
GCGCTGTATC GGATCGTGCA GGAATCGCTG ACCAACGCAT CGAAATACGC GCATGCGACC
ACGGTGTCGG TGGCGCTCGA TGTGGGTGAA GAGGGCGTGC GCTTGCGCGT GCGCGACAAC
GGCCGTGGGT TCCCCGCCGA TATCGAGCGG CGCCGCATGG TCGGCCACCA CGGCCTGCTG
GGGATGGAGC AGCGCGCCAT TGCGCTGGGC GGCACGCTCG TCATCGACTC AATGCCAGGC
GGCGGTGTGA CGATCATCGT CGAGCTGCCT CCCAGCGATG CCGTATTCGA CCGAGGCGCG
GCTAACGAAC CGTCGGGCAT GCAGGCGCTG ACTGGCGGTA TTGCGCCTGC CCCGGGCCGC
GGCGGCGCGA CGGTGTAA
 
Protein sequence
MGLHAMRSSL RSTLLLAGGI LLTLGVLIAS ETGNIRLSQG YRQVIQSQQA ETAINELLAE 
LVNAEAGQRG FLLTGKDEYL DPYNKAIPHI HALMAEIRDH YANDPDALKL FSETALQVSR
KLTEMELTLI YGKRDLEVAL DLVRTDFGKA SMEAVRQGLD RLRQREIATV ARSLEHAERD
LALSRYGIAL ITAVNIILLV VLGMQHAKRL AVTERERDMA EEESQKLDRM VRERTRQLSD
LAAHLQRVTE DEKTRLAREL HDELGAILTA TKMDLHWLRS RIHANEPAVS EKITRVMAHV
DQGIQIKRRL IEDLRPTILL NLGLVEALSQ LTEDVGTRNG WHTEVSLPDD MPKLTDDAAI
ALYRIVQESL TNASKYAHAT TVSVALDVGE EGVRLRVRDN GRGFPADIER RRMVGHHGLL
GMEQRAIALG GTLVIDSMPG GGVTIIVELP PSDAVFDRGA ANEPSGMQAL TGGIAPAPGR
GGATV