Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0142 |
Symbol | |
ID | 6288354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 160751 |
End bp | 162208 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623713 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001897737 |
Protein GI | 187927250 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.843077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGC ATGCCATGCG GTCATCCTTG CGCTCCACTC TGCTGCTCGC CGGCGGCATT CTGCTGACGC TCGGGGTGCT GATTGCCTCG GAGACGGGCA ACATCCGCCT GAGCCAGGGC TATCGGCAGG TGATTCAGTC GCAGCAGGCT GAAACCGCCA TCAACGAACT GCTTGCCGAG CTGGTGAACG CCGAGGCGGG GCAACGCGGG TTCCTGCTCA CGGGCAAGGA CGAATACCTC GATCCATACA ACAAGGCCAT CCCGCACATC CACGCGTTGA TGGCAGAAAT TCGCGATCAC TACGCCAACG ATCCTGACGC GCTGAAGCTG TTCTCGGAGA CGGCGCTCCA GGTGAGCCGC AAGCTCACCG AGATGGAACT CACGCTCATT TACGGCAAGC GTGATCTGGA AGTGGCGCTC GATCTCGTGC GCACCGATTT CGGCAAGGCA TCGATGGAAG CGGTGCGGCA GGGGCTGGAC CGCCTGCGTC AGCGTGAGAT CGCCACCGTG GCCCGCAGCC TTGAACACGC CGAGCGCGAT CTGGCGCTCT CGCGCTACGG CATTGCGCTC ATCACGGCGG TCAACATCAT CCTGCTGGTG GTACTGGGCA TGCAGCACGC CAAGCGCCTT GCCGTGACGG AGCGTGAGCG CGACATGGCG GAGGAGGAAA GCCAGAAGCT CGACCGTATG GTGCGTGAGC GCACGCGTCA GTTGTCCGAC TTGGCTGCGC ACTTGCAGCG TGTGACCGAA GATGAGAAGA CGCGCCTCGC GCGCGAGCTG CACGACGAGC TGGGCGCCAT CCTCACCGCC ACCAAGATGG ACCTCCACTG GCTGCGTTCA CGCATTCATG CCAATGAGCC TGCGGTAAGC GAAAAGATCA CGCGCGTGAT GGCCCACGTG GATCAGGGCA TCCAGATCAA GCGCCGCCTG ATCGAAGACC TGCGCCCGAC GATCCTGCTC AACCTGGGTT TGGTGGAAGC GCTCTCGCAA TTGACGGAGG ACGTGGGCAC GCGCAATGGC TGGCATACGG AAGTGAGCCT GCCCGACGAT ATGCCCAAGC TGACCGACGA TGCGGCCATC GCGCTGTATC GGATCGTGCA GGAATCGCTG ACCAACGCAT CGAAATACGC GCATGCGACC ACGGTGTCGG TGGCGCTCGA TGTGGGTGAA GAGGGCGTGC GCTTGCGCGT GCGCGACAAC GGCCGTGGGT TCCCCGCCGA TATCGAGCGG CGCCGCATGG TCGGCCACCA CGGCCTGCTG GGGATGGAGC AGCGCGCCAT TGCGCTGGGC GGCACGCTCG TCATCGACTC AATGCCAGGC GGCGGTGTGA CGATCATCGT CGAGCTGCCT CCCAGCGATG CCGTATTCGA CCGAGGCGCG GCTAACGAAC CGTCGGGCAT GCAGGCGCTG ACTGGCGGTA TTGCGCCTGC CCCGGGCCGC GGCGGCGCGA CGGTGTAA
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Protein sequence | MGLHAMRSSL RSTLLLAGGI LLTLGVLIAS ETGNIRLSQG YRQVIQSQQA ETAINELLAE LVNAEAGQRG FLLTGKDEYL DPYNKAIPHI HALMAEIRDH YANDPDALKL FSETALQVSR KLTEMELTLI YGKRDLEVAL DLVRTDFGKA SMEAVRQGLD RLRQREIATV ARSLEHAERD LALSRYGIAL ITAVNIILLV VLGMQHAKRL AVTERERDMA EEESQKLDRM VRERTRQLSD LAAHLQRVTE DEKTRLAREL HDELGAILTA TKMDLHWLRS RIHANEPAVS EKITRVMAHV DQGIQIKRRL IEDLRPTILL NLGLVEALSQ LTEDVGTRNG WHTEVSLPDD MPKLTDDAAI ALYRIVQESL TNASKYAHAT TVSVALDVGE EGVRLRVRDN GRGFPADIER RRMVGHHGLL GMEQRAIALG GTLVIDSMPG GGVTIIVELP PSDAVFDRGA ANEPSGMQAL TGGIAPAPGR GGATV
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