Gene Rpic_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0126 
Symbol 
ID6289794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp145295 
End bp146476 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID642623697 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001897721 
Protein GI187927234 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.524714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC GAATCGTCAT CGCCTCCGCC GCCCGTACCC CGATGGGCGC CTTCCAGGGC 
GAACTCGCCA GCCTCACCGC TCCGCAACTC GGCGCCGCTG CCATTCGCGC GGCGGTCGAA
CGTGCGGGCT TGAAACCGGA ACAGATCGAA GAAGTCATCA TGGGCTGTGT TCTGCCTGCG
GGCCAGGGGC AGGCACCGGC ACGCCAGGCC GCATTGGGCG CGGGCCTGCC GCTGTCGGTC
GGCTGCACCA CGGTCAACAA GATGTGCGGT TCGGGCATGC GCGCGGCCAT GAACGCGTAT
GACGCACTGC TCGCGGGTTC GGTCGACGTG GTGGTCGCGG GCGGCATGGA AAGCATGACG
AATGCGCCGT ACCTGATCCC GAAAGGCCGC GGCGGTTATC GCATCGGCCA CGGCATGATC
TACGACCACA TGATGCTGGA CGGCCTGGAA GACGCATACG ACAAGGGCCG CGCCATGGGC
ACCTTCGGCG AGGACTGCGC CGAGAAGTAC GGCTTCACGC GCGAAGCCCA GGACCACTTC
GCGATGACGT CCGTGCGCCG CGCGCAGGAG GCCACCGAAT CCGGCGCATT CCGCTGGGAA
ATCACGCCCG TTACCGTGTC GAGCAAAGCG GGCGACACCG TCATCGACAC CGATGAAGGC
CCGCGCCGCA TCAAGGTCGA CAAGATTCCC TCGCTCAAGC CCGCGTTCAA GAAAGACGGC
ACGGTGACGG CCGCGTCGTC TTCGTCGATC AACGATGGGG CGGCTGCGCT GGTGATGATG
CGCGAGTCGA CTGCCAAGCA ACTCGGCATC ACGCCGCTGG CGGTGATGCT GGGCCACACC
ACGCACGCAC AGGCACCGGG CTGGTTCACG ACGGCGCCGG TCACAGCCAT CGACAAGCTG
TTCAAGAAGC TCGACTGGAA CTCGGGGAAC GTCGACCTGT TCGAGATCAA CGAGGCGTTT
GCCGTGGTGC CGATGGCCGC GATGCACGAC CTGCACATCC CGCACGAGAA GGTGAACGTG
AACGGCGGCG CATGCGCGCT GGGCCATCCG ATCGGCGCAT CCGGCGCGCG CGTGATCGCG
ACGCTGCTGG GCGCGCTGCA ACACCGTGGC GGCAAGCGCG GTGTGGCCAG CCTGTGCATC
GGCGGCGGTG AAGCCACGGC CGTCGGCATC GAACTCTACT AA
 
Protein sequence
MSDRIVIASA ARTPMGAFQG ELASLTAPQL GAAAIRAAVE RAGLKPEQIE EVIMGCVLPA 
GQGQAPARQA ALGAGLPLSV GCTTVNKMCG SGMRAAMNAY DALLAGSVDV VVAGGMESMT
NAPYLIPKGR GGYRIGHGMI YDHMMLDGLE DAYDKGRAMG TFGEDCAEKY GFTREAQDHF
AMTSVRRAQE ATESGAFRWE ITPVTVSSKA GDTVIDTDEG PRRIKVDKIP SLKPAFKKDG
TVTAASSSSI NDGAAALVMM RESTAKQLGI TPLAVMLGHT THAQAPGWFT TAPVTAIDKL
FKKLDWNSGN VDLFEINEAF AVVPMAAMHD LHIPHEKVNV NGGACALGHP IGASGARVIA
TLLGALQHRG GKRGVASLCI GGGEATAVGI ELY