| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0125 |
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| Symbol | |
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| ID | 6287791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 144572 |
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| End bp | 145285 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642623696 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001897720 |
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| Protein GI | 187927233 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.330397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG CAACGTCCCG CCGCACGCGC ACCGCGCTCA TCCTGGGCGC GTCGCGCGGC
ATCGGCCTGG AAACGGTCAA GCAGTATCGC GCGGATGGCT GGCGCGTGAT TGCCACCGTG
CGCACGCAAG AAGCAGCGCA CGCACTGCAG GCATTGGGCG CTGAAACGCA TGTGCTGGAC
CTGACCGACG CCAACGCCGT CGCCGGCCTC GCGTGGAAGC TCGACGGCGA AGCGCTGGAC
GTGGCGATCT ACGTGGCGGG CATCTACGGC CCGCGCACGC AGGGTGCCAC GCCCGTCAGC
CAGGCCGACT TTGATGCCGT GATGCACACC AACGTGTGGG CCCCGATGGG CGTGCTGCCC
GCCGTGCTGC CGATGGTGGA AGCCGGACGC AATGGTGCGG ACGAGCCTGG CGGCGTGCTC
GCCGTCATCT CCAGCCGCAT GGGCAGCATC GGCGACATGG CGGGCAACGG CGGCTGGCTG
TATCGCGCGA GCAAGGCGGC GGTGAATGCC GTATTGCGCG GGGTGTCGAT CGACGCCAAG
AACGCCACGT GCCTGACGTT CCACCCCGGT TGGGTACAGA CCGACATGGG CGGCGCGGAC
GCGGCCATCA CGCCGCAGGA GAGTGTGGCT GGCATCCGCC GCGTGATCGC CGGCGCCACG
CGCGCCGACA ACGGCGGGTT CCGCAACTAC GACGGCAGCG TCATTGAATG GTGA
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| Protein sequence | MTNATSRRTR TALILGASRG IGLETVKQYR ADGWRVIATV RTQEAAHALQ ALGAETHVLD
LTDANAVAGL AWKLDGEALD VAIYVAGIYG PRTQGATPVS QADFDAVMHT NVWAPMGVLP
AVLPMVEAGR NGADEPGGVL AVISSRMGSI GDMAGNGGWL YRASKAAVNA VLRGVSIDAK
NATCLTFHPG WVQTDMGGAD AAITPQESVA GIRRVIAGAT RADNGGFRNY DGSVIEW
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