| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0105 |
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| Symbol | |
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| ID | 6288209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 122547 |
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| End bp | 123434 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642623676 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001897700 |
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| Protein GI | 187927213 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCT CAGTCTTTCG ACCGGGGCTG TTCCAGGGGC AGGTGGCCGT GGTGACGGGT
GGCGGCAGCG GCATCGGCCG GTGTACTGCG CATGAGTTGG CGTCGCTGGG TGCGGCGGTC
GCGTTGGTGG GGCGCAACGC AGAGAAGCTC GCCGCCGTGC GCACGGAGAT CGTTGAAGCG
GGCGGCACCG CGCACGCCTA CGTCTGCAAC ATCCGCGACG AGGCTGCCGT GCAAGCCACC
GTCGCGCAAA TCTACGGCGA GCACGGCCGC ATCGACGCGC TCGTCAACAA CGCGGGCGGG
CAGTTTCCCT CGCCGCTCAA GGACATTTCC GCCAAGGGCT GGGAAGCCGT CGTGCAGACG
AACCTGACCG GCGGCTTCCT GATGGCGCGC GAGTGCCTCA ACCAGGCGAT GCAGCAGCGC
GGCGGCGCCA TCGTCAATAT CGTGGCGGAC ATGTGGGGCG GCATGCCCAA CATGGGCCAC
TCCGGCGCCG CGCGGGCGGG CATGGTGAAC TTTACGGAGA CGGCCGCATT CGAGTGGGCG
CAATACGGCG TGCGCGTGAA CGCGGTAGCG CCGGGCTACG TCGCGTCGTC GGGCATGGAT
GCGTATCCGC CGTGGATGGC CGAGACCATC CGCAGCATGC CGTCGACGGT GCCGCTCGGG
CGCTTTGCCA CCGAGGCGGA AGTGTCTTCG GCCATCGTGT ATCTGCTCTC GGAAGCCGCG
GCATTCATTA CCGGCACGAC GTTGCGCGTG GACGGCGGCC GCCCGAACGT GCGGCCCGGT
TCGCCCATGC CGGCTCCGCG TCATGGTGCC GAGCCGTTCA ACGGCTTCCA CCTGGCCGTG
ACGCCCAAGG TGCTGCAAGG CGAGGAGGAC CGCCATGCCG GCGCTTGA
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| Protein sequence | MYRSVFRPGL FQGQVAVVTG GGSGIGRCTA HELASLGAAV ALVGRNAEKL AAVRTEIVEA
GGTAHAYVCN IRDEAAVQAT VAQIYGEHGR IDALVNNAGG QFPSPLKDIS AKGWEAVVQT
NLTGGFLMAR ECLNQAMQQR GGAIVNIVAD MWGGMPNMGH SGAARAGMVN FTETAAFEWA
QYGVRVNAVA PGYVASSGMD AYPPWMAETI RSMPSTVPLG RFATEAEVSS AIVYLLSEAA
AFITGTTLRV DGGRPNVRPG SPMPAPRHGA EPFNGFHLAV TPKVLQGEED RHAGA
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