| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0101 |
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| Symbol | |
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| ID | 6286568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 116249 |
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| End bp | 118528 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623672 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001897696 |
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| Protein GI | 187927209 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG CACAGATCGA ACGCAAGCGC ACCGAACATT CGGTGGTGGG TTATCTGACC
GGCGCGATGA GCTTCGCCGT GGTTTCGGCG CCGGCACTGG CCGACACGAA GAAAGACGCC
GTGTCCGCCA CCCTGCCCGA GCAAACCGTC ACCGGCACCA ACGGGTTCAA GGCGGATGCG
GCCTCGGGCG GCAAATTCAC CGCGCCGCTG CTCGATACGC CCAAGTCCGT CACGGTGATC
CCCGCAGAGG TATTGCAGGG CACCGGCTCC GTCACACTCA CCGAGGCGCT GCGCACGGTG
CCGGGCATCG CATTTGGCGC CGGCGAAGGC GGCAACCCCG TCGGTGATCG CCCGTTCATC
CGCGGCTACG ACGCGCAGGC CAGTACCTTC CTCGACGGGC TGCGCGACAT CGGTGCGCAA
TCGCGCGAAA TGTTCAACGT GGAATCGGTG GAAGTCATCA AGGGCCCGTC GGGTGCGTAT
GAAGGCCGCG GCGCGGCAGG CGGGGCGGTC AACATCCTCA CCAAGACGCC CAAGCTTGAG
CACTTCACCG AGGGCACGCT GTCGGTCGGC AACGCGGCGT ACAAGCGGGC CACGGCCGAC
GGCAACTACC AGATCGGCGA GCACGCCGCG TTCCGCCTGA ACGCGATGGC GCACGACGCC
GCCGTTGCCG GCCGTGACGT GACGAGCTTC AGCCGCTGGG GCATCGCGCC GTCCATCGCC
GTTGGGCTCG GTACGCCCAC GCGCGCCACG CTGTCGTACT ACCACCTGCA ATCGAACGAC
ACGCCAGACA CGGGCATTCC ATACAACAAC GGCACGTTCA ACCGCCGCAC CGACGGCCGC
CCGCAACTGT TCGGCCCCGG CGACGGCGCG CCCGTGAATG TCGACCGCAA CGTCTACTAC
GGCCTGTCGC GCGACTTCCG CCGCGACCGC GTCGACATGG GCACCTTCAC GCTGGAGCAC
GATGTGTCGA GCGCGCTGAA GCTGCGCAAC ACCATGCGCA TTGCCCGCAC GAGCCAGGAC
ACCATCTGGA CGCAGCCCGA CGACAGCCAG GGCAACATCT ATTACGGCAT GGTCTGGCGC
CGCACCAATT CGCGCTCTTC GGTGGCCAAC ACCGTCGCCA ACCAGACGGA AGCGACCGGC
AAGTTCGACA CCGGTGGCCT CAAGCACAGC TATGCGGCCG GCCTGGAGTT CTCGCGCGAG
CGCAGCAGCA ACGACACCTA CGCCGTGGCC ACCGGCAGCA ACCGCTGCCC CAACGGCATC
GGCGCGGCGG GCGGCTACAA CTGCGCAGAT CTCTTCAACC CAAACCCGAA CGACCCCTGG
GCCGGCGGCA TCAGGCTCAA CAACAATCCA GCAGAGACGA CGGTGCGCAC GCAGTCGGCC
TACGTATTCG ACACGGTCGA GCTGTCGCCA CGGTGGCAAG TCAACGGCGG GCTGCGCTTT
GATCGCTATT CGGCATCGGC CACCACGTCG GCGAATGCGC AGGGCGTGCG TTCGAGCTTC
TCGCGCGACG ACAACCTGCT GAACTACCAG CTCGGCCTCG TGTTCAAGCC TGCGCAGAAC
GGCAGCATCT ATCTGGCGTA CGGCACATCG TCGACGCCGT CGGGCTCGGT GGCGGGCCAG
GGTGCCGATA CAAGCGCGCT CACGCCTGAC CGCTCCAGCA ATCGCGGGGA CGTGCTCGCT
CCGGAAAAGA ACCGCGCCTA CGAACTCGGC ACCAAGTGGA ACGTGCTCGA CAGCAAGCTG
GCACTGACGG CCGCGATCTT CCGGATCGAG ACGACCAACG CCCGCATCGT GCAGCAGGAC
GGCACCGCCG CCATGGCGGG CAACAAGCGC GTCGATGGCT TCGAGCTGGG CTGGTCGGGC
GCGCTGACCA ACCGCTGGCA GGTGTTCGGA GGCTACACGT ATCTGAAGAG CGAACTGCGC
AACAACGGCG GCGCAGGCGC AGCCTTTGGC GGCACCAACG GAACGGCCTT CCCCAACACG
CCAAAGAACA GCTTCAGCCT GTGGACGACC TATCAGCCGA TGCCGAAGCT CACGCTCGGC
GGCGGCGCGT ATTACGTCTC GAAGGTGTGG GGCAGCGCCA ACCCCGCCAA CCCGAAGTGG
GTGCCGGCCT ACTGGCGCTT TGACGCCATG GCCGCCTACC GCATCGACAA GCACACCACG
TTGCAGCTGA ATGTGCAGAA CGTGTTCGAC AAGGTGTACT TCAATCAGGC GTATGCATCG
CATTACGCAT CGCTGGCACC GGGCCGCACG GCCATCCTGA CGCTGGGCAT TCGCTACTGA
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| Protein sequence | MSAAQIERKR TEHSVVGYLT GAMSFAVVSA PALADTKKDA VSATLPEQTV TGTNGFKADA
ASGGKFTAPL LDTPKSVTVI PAEVLQGTGS VTLTEALRTV PGIAFGAGEG GNPVGDRPFI
RGYDAQASTF LDGLRDIGAQ SREMFNVESV EVIKGPSGAY EGRGAAGGAV NILTKTPKLE
HFTEGTLSVG NAAYKRATAD GNYQIGEHAA FRLNAMAHDA AVAGRDVTSF SRWGIAPSIA
VGLGTPTRAT LSYYHLQSND TPDTGIPYNN GTFNRRTDGR PQLFGPGDGA PVNVDRNVYY
GLSRDFRRDR VDMGTFTLEH DVSSALKLRN TMRIARTSQD TIWTQPDDSQ GNIYYGMVWR
RTNSRSSVAN TVANQTEATG KFDTGGLKHS YAAGLEFSRE RSSNDTYAVA TGSNRCPNGI
GAAGGYNCAD LFNPNPNDPW AGGIRLNNNP AETTVRTQSA YVFDTVELSP RWQVNGGLRF
DRYSASATTS ANAQGVRSSF SRDDNLLNYQ LGLVFKPAQN GSIYLAYGTS STPSGSVAGQ
GADTSALTPD RSSNRGDVLA PEKNRAYELG TKWNVLDSKL ALTAAIFRIE TTNARIVQQD
GTAAMAGNKR VDGFELGWSG ALTNRWQVFG GYTYLKSELR NNGGAGAAFG GTNGTAFPNT
PKNSFSLWTT YQPMPKLTLG GGAYYVSKVW GSANPANPKW VPAYWRFDAM AAYRIDKHTT
LQLNVQNVFD KVYFNQAYAS HYASLAPGRT AILTLGIRY
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