Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0100 |
Symbol | |
ID | 6286567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 115479 |
End bp | 116249 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642623671 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_001897695 |
Protein GI | 187927208 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.334736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCG ACGCTGCAAC CGCCGCAGCC GCCGGAGCCA CCGCAGCCGA TCCTGCGGTG GTCGATGCCA TCCACGCCGT GCTCACCGGC CCCGCTGACC GCGCCGCGCG CTGGCTGGCG GCAGCCGCCC GGCGCGGGCA CACGGAAGCG CAGGCCATCT TCGGCCAATG GCTGCTCGAT GGCCGCGGTG TTGAACGCAA CCCGGCCGAA GCGTTGTTCT GGTTCAAGAC GGCCGCGCTG TCGGGCCACG CGATGGCCGC CAACATGCTG GGCCGCTGCT ATGAGCACGG CTGGGGCGCG CCCGCCTGCG ACAAGACCGC CACGCACTGG TACGCCCGCG CCGCCGATGC TGGCCTCGAC TGGGGCCAGT ACAACTACGC AACACGCCTG CAACTCGGGC GCGGCATCCC GGCGGACCGC GCCCGCGCGT TTGCACTGTT CCAAGCGGCG GCCGCACAAG GGCACGCCAA GTCGATCAAC GTGCTGGGGG GCTTCTATGA AGACGGCTGG GAAGTCGAGG CGGACACGGC GATGGCCCTG CGCTGCTACC TGCGCGCCGC AGCGGGCGGC GACTTCCGCG GCCAGTTCAA CGCAGCACGC CTGCTCGCCC TCGCGAATCA CGCAGACGAT GCCCTCGGCT GGATGCAGGC GGTGCCGCGC ACCGCCACCC CGACCTTTCT TGCGAAAGCG CATGACTTTC TCGCCGGTCA TCCCGATGTG CGTTTGCGCG CGTTGGCCGA CGTGCTGAAA ACCCCATCGT TATGTTGCTG A
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Protein sequence | MPADAATAAA AGATAADPAV VDAIHAVLTG PADRAARWLA AAARRGHTEA QAIFGQWLLD GRGVERNPAE ALFWFKTAAL SGHAMAANML GRCYEHGWGA PACDKTATHW YARAADAGLD WGQYNYATRL QLGRGIPADR ARAFALFQAA AAQGHAKSIN VLGGFYEDGW EVEADTAMAL RCYLRAAAGG DFRGQFNAAR LLALANHADD ALGWMQAVPR TATPTFLAKA HDFLAGHPDV RLRALADVLK TPSLCC
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