| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0088 |
|---|
| Symbol | |
|---|
| ID | 6287810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 102724 |
|---|
| End bp | 103749 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642623661 |
|---|
| Product | conserved hypothetical/unknown signal peptide protein |
|---|
| Protein accession | YP_001897685 |
|---|
| Protein GI | 187927198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCC GCGCAACGAT GCGCTGGTGT CTGACCGCCT TGCTGGCGTG GTCCGGTCAC
GCCCTGGCGT GGGACTACAC GCCTGGCGCC ATTCCGGGGC TGATCAGCGT GCTTGGGTTC
CTGACCGTGC AGTCGCAGGC GCTCGACCGC GCCATCCAGC GCTTTCCCGG CCAGCGTGAG
GAGCTGATCC GCGCCCGTAC CCAGTTCGAC AACACCTTCC CGCAGGCGCT GGCCCGCACC
CGCCGCCTGA TCGCCGGCAT TCCGCTATCC GACGACGAGC GCCAACTGCT GATCGAGCGC
GCGCTGGACC TCCACCAGCC CAGCGTGGGC GTTGCCACCC AGACGGCCGA GACCGCCCAC
TCGCTGGCCG AACGCGTGGT TGCGCGTGCG CAGGGCAGCC AGGACCGCGC CACGCTGCAG
ACCCTGCTGG CGGTGGTCTA CGACGACCGC CCCGCCGATG AGCTGGGCAG CCGCTTTACC
CAGGCCGTGA CCCTGTCTGA CTGGCCGAAT GCGCGCGGCG CGAGCCTCGC CCTGCGGCTG
CCGTTCTCGT GGGAACGCGT GCCGCCCACG GCGCCGCGCA AGCCCGACCC GGCACGGGTG
GCGATCGGCG CGTGGGCCAA TCAGGGCGGC TCTGGGCTGT CGCGCATTGA GCTCATCGTG
CGCCCCACCG AAGGCGACCC CGAAACCGTG CCCGACAGCC GCGAGCCGCG CTGGATGCGC
GATGCCGTGA AGCAAGCCGT GGCGGCCCCC TGCCGACTGC TCGGCTGGGG TACGCAATCG
TTCGGCGGGC GCATCGGCGT GTGGGCCAGC TACATCGGCG AATCGCCCGG GCCGAATATC
CCGCGCGCCC CCGGCAACAC GCTGGTCGGC CGCGTCTTCA TGGTGCCGAC CGACGGCGCG
CTGCTGATGC TGCACATGCA GTCTCTCGCC ACATCGCCCG AGCAGGCCAG CGCCGTGCGC
TTGCGGTACG AACCATTGTG GGACGCCGTG GCCGCGTCGT TCAGCGTGTC CGGCGCCAAG
CCGTAG
|
|---|
| Protein sequence | MPSRATMRWC LTALLAWSGH ALAWDYTPGA IPGLISVLGF LTVQSQALDR AIQRFPGQRE
ELIRARTQFD NTFPQALART RRLIAGIPLS DDERQLLIER ALDLHQPSVG VATQTAETAH
SLAERVVARA QGSQDRATLQ TLLAVVYDDR PADELGSRFT QAVTLSDWPN ARGASLALRL
PFSWERVPPT APRKPDPARV AIGAWANQGG SGLSRIELIV RPTEGDPETV PDSREPRWMR
DAVKQAVAAP CRLLGWGTQS FGGRIGVWAS YIGESPGPNI PRAPGNTLVG RVFMVPTDGA
LLMLHMQSLA TSPEQASAVR LRYEPLWDAV AASFSVSGAK P
|
|---|
| |