Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0087 |
Symbol | |
ID | 6287809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 101262 |
End bp | 102464 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642623660 |
Product | Rh family protein/ammonium transporter |
Protein accession | YP_001897684 |
Protein GI | 187927197 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCCA TCAAAACCGG GGGCGACGCG CTCTTCATCC TGCTGGGCGC GATCATGGTG CTGGCCATGC ATGCCGGCTT CGCGTTCCTT GAGCTGGGCA CCGTCCGCAA GAAGAACCAG GTCAACGCAC TGGTCAAGAT CCTGGTCGAC TTTGCCGTGT CGACCATCGC GTACTTCTTC ATCGGCTATT CAGTCGCGTA CGGCGTCAAC TTCTTTACCG GCGCCGACGT GCTCGCCCAG CAGAACGGCT ACGAGCTGGT GAAGTTCTTC TTCCTGCTGA CCTTCGCGGC CGCTATCCCG GCCATCATCT CCGGCGGCAT TGCCGAGCGC TCGCGCTTCG AGCCGCAACT GGCGGCGACC TTCGTGCTGG TGGGCTTTGT CTACCCGTTC TTTGAGGGCA TCGCCTGGAA CGAGCGCTTC GGTATCCAGC ACTGGCTGCA GAGCGTGACG GGCGCGGAGT TCCACGACTT CGCCGGCTCG GTGGTCGTGC ACGCGGTGGG CGGCTGGATC GCGCTGCCGG CGGTGCTGCT GCTGGGCGCC CGCCACGGCC GCTACAAGGA CGACGGCCGC ATCGCCGCGC ATCCGCCGTC CAACATCCCG TTCCTGGCCG CCGGCGCCTG GGTGCTGGCG GTGGGCTGGT TCGGCTTCAA CGTGATGAGC GCGCAGACGC TCGACAAGAT GAGCGGCCTG GTCGCCATCA ACTCGCTGAT GGCCATGGTG GGCGGCACGC TCACCGCGTG GTGGATGGGC AAGAACGATC CGGGCTTCTC GTACAACGGG CCGCTGGCCG GCCTGGTGGC CGTGTGCGCG GGCTCCGACG TGATGCACCC GCTGGGGGCG CTTGCCGTCG GCGGCATCGC GGGCGTGCTG TTTGTCTGGA TGTTCACGCG CGTGCAGAAC GTCTGGCGCA TCGACGACGT GTTGGGCGTG TGGCCGCTGC ACGGCCTGTG TGGCGCGTGG GGTGGCATCG CGGCCGGCAT CTTCGGCCTG AAGGCGCTCG GCGGCCTGGG CGGCGTGTCG TTCTGGGCGC AGGTGGCGGG CACGGCCGGC GGCATTGTCA TTGCGCTGGT CGGCGGCACG GTGGTGTACG GCACGCTGCG CAAGCTCGTT GGGCTGCGGT TGGACCGCGA GGCCGAATTC ATGGGCGCCG ACCTGGCGAT CCACCGCGTC TCGTCCACGC CGGAATCGGA AACGCACTGG TAA
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Protein sequence | MNSIKTGGDA LFILLGAIMV LAMHAGFAFL ELGTVRKKNQ VNALVKILVD FAVSTIAYFF IGYSVAYGVN FFTGADVLAQ QNGYELVKFF FLLTFAAAIP AIISGGIAER SRFEPQLAAT FVLVGFVYPF FEGIAWNERF GIQHWLQSVT GAEFHDFAGS VVVHAVGGWI ALPAVLLLGA RHGRYKDDGR IAAHPPSNIP FLAAGAWVLA VGWFGFNVMS AQTLDKMSGL VAINSLMAMV GGTLTAWWMG KNDPGFSYNG PLAGLVAVCA GSDVMHPLGA LAVGGIAGVL FVWMFTRVQN VWRIDDVLGV WPLHGLCGAW GGIAAGIFGL KALGGLGGVS FWAQVAGTAG GIVIALVGGT VVYGTLRKLV GLRLDREAEF MGADLAIHRV SSTPESETHW
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