Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0083 |
Symbol | |
ID | 6288632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 94401 |
End bp | 95123 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642623656 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001897680 |
Protein GI | 187927193 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACT TCCGTACCTA CGGCCTCGCC GCGCCCCCAC ACTCGCACGA CTTCATGCAA GTCGTGATGC CCGCACGCGG CATCCTCGAG ATGGACGTGG ACGGCCGCGG CGGCCGCGTC GACACGCACC ACGCCGCGCT CATCCCGGCT GGCGCCACGC ATGCGTTTGA AGCCACGGGC GCCAACCGTT TCATCGTGTT CGACATTCCC GGCCAGACCG TGGACGCCCC CAGCCTGGGC GGCCTGGCCG ATCGCGTGTT CTTTCCACTT ACGCCGGGCC TGCGCGCACT GACGACCTGG CTGCAGGACG CGCCCATCGT CGATGCCGTA CTGGCCAATG CGTGGTCGTC TCTCGCGCTG GCGACGCTCG CGGCGCATCC GGTCAACCAA GCCGCGCAGA TCCGCGCACG CCCCGACGCG CGTGCCGAGC GCGCATGGCA CGCCATCGAG CACCGCTACG CCGAGCCGCT CACCGTCGAT GCGCTTGCCG CCGAGGCGGG CGTCAGTGCG CGTCGCCTCG CCACGCTGTT CCGTGCCACC TATGGCACCA CGCTGCATGC GCATCTGGCC CAGGTACGGC TGCGGCATGC ATTGACGCTG CTGGAAACCA CCGCCTTGCC CATCGCCGAG ATTGCCGCAC GCACCGGCTA CTACGACCAG AGCGCCCTCA CGCGCCACCT CAAGGCCGCA CACGGCGTCA CGCCCGCAGC GGTGCGCCGC TAA
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Protein sequence | MLDFRTYGLA APPHSHDFMQ VVMPARGILE MDVDGRGGRV DTHHAALIPA GATHAFEATG ANRFIVFDIP GQTVDAPSLG GLADRVFFPL TPGLRALTTW LQDAPIVDAV LANAWSSLAL ATLAAHPVNQ AAQIRARPDA RAERAWHAIE HRYAEPLTVD ALAAEAGVSA RRLATLFRAT YGTTLHAHLA QVRLRHALTL LETTALPIAE IAARTGYYDQ SALTRHLKAA HGVTPAAVRR
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