Gene Rpic_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0083 
Symbol 
ID6288632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp94401 
End bp95123 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID642623656 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001897680 
Protein GI187927193 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACT TCCGTACCTA CGGCCTCGCC GCGCCCCCAC ACTCGCACGA CTTCATGCAA 
GTCGTGATGC CCGCACGCGG CATCCTCGAG ATGGACGTGG ACGGCCGCGG CGGCCGCGTC
GACACGCACC ACGCCGCGCT CATCCCGGCT GGCGCCACGC ATGCGTTTGA AGCCACGGGC
GCCAACCGTT TCATCGTGTT CGACATTCCC GGCCAGACCG TGGACGCCCC CAGCCTGGGC
GGCCTGGCCG ATCGCGTGTT CTTTCCACTT ACGCCGGGCC TGCGCGCACT GACGACCTGG
CTGCAGGACG CGCCCATCGT CGATGCCGTA CTGGCCAATG CGTGGTCGTC TCTCGCGCTG
GCGACGCTCG CGGCGCATCC GGTCAACCAA GCCGCGCAGA TCCGCGCACG CCCCGACGCG
CGTGCCGAGC GCGCATGGCA CGCCATCGAG CACCGCTACG CCGAGCCGCT CACCGTCGAT
GCGCTTGCCG CCGAGGCGGG CGTCAGTGCG CGTCGCCTCG CCACGCTGTT CCGTGCCACC
TATGGCACCA CGCTGCATGC GCATCTGGCC CAGGTACGGC TGCGGCATGC ATTGACGCTG
CTGGAAACCA CCGCCTTGCC CATCGCCGAG ATTGCCGCAC GCACCGGCTA CTACGACCAG
AGCGCCCTCA CGCGCCACCT CAAGGCCGCA CACGGCGTCA CGCCCGCAGC GGTGCGCCGC
TAA
 
Protein sequence
MLDFRTYGLA APPHSHDFMQ VVMPARGILE MDVDGRGGRV DTHHAALIPA GATHAFEATG 
ANRFIVFDIP GQTVDAPSLG GLADRVFFPL TPGLRALTTW LQDAPIVDAV LANAWSSLAL
ATLAAHPVNQ AAQIRARPDA RAERAWHAIE HRYAEPLTVD ALAAEAGVSA RRLATLFRAT
YGTTLHAHLA QVRLRHALTL LETTALPIAE IAARTGYYDQ SALTRHLKAA HGVTPAAVRR