Gene Rpic_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0078 
Symbol 
ID6288884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp90003 
End bp90710 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID642623651 
ProductGlutathione S-transferase domain 
Protein accessionYP_001897675 
Protein GI187927188 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.926583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC TCTACTACTG CGCCACGCCC AATGGCCTGA AGATGGCACT GTTCTTTGCC 
GAAACCGGCT TGCCGCACCG CGTCATCCCC GTCGATATCA GCCGGGGTGA CCAGTTCAAG
CCCGAGTTCC TGGCCATCTC GCCCAACAAC AAGATCCCGG CCATGGTCGA TCACGACCCG
GCCGAAGGCA GCGACCCCGT GGTGCTGTTT GAATCGGGCG CCATGCTGCT TTACCTGGCC
GAGAAGACCG GCCAGCTGAC GCCCGCCGAC CTGCACGGCC GCATGGAAGT GCTCAAGTGG
CTGTTCTGGC AGGTGGGCGG CCTGGGCCCG ATGGCCGGGC AGATCGGCCA CTTCAACGTG
TATGCCCCCG AGCGCGTGCA CTACGCCATC GAGCGCTACA CCAAGGAAAC GAACCGCCTG
TACGGTGTGC TCGACCGCCG CTTGGCCGAT CGCCCCTACA TTGCCGGCAA CGACTACACC
ATCGCCGACA TCGCGGCCTA TCCGTGGATC GTGCCGCACG CCGGGCATGG TCAGGACCTG
AACGACTTTC CGAATCTGCA GCGCTGGTTC GAAGCCGTTG GCGCACGCCC TGCCACGCAG
CGCGCCTATG CCGGGGTCGA GCGCGCCTAC TCGCGCCGCC GCGAAGACAT CTCCGACGAC
GAGCGCAACG TGCTGTTGGG CCAGACGGCC AGCTCCACCG CGCGCTGA
 
Protein sequence
MIDLYYCATP NGLKMALFFA ETGLPHRVIP VDISRGDQFK PEFLAISPNN KIPAMVDHDP 
AEGSDPVVLF ESGAMLLYLA EKTGQLTPAD LHGRMEVLKW LFWQVGGLGP MAGQIGHFNV
YAPERVHYAI ERYTKETNRL YGVLDRRLAD RPYIAGNDYT IADIAAYPWI VPHAGHGQDL
NDFPNLQRWF EAVGARPATQ RAYAGVERAY SRRREDISDD ERNVLLGQTA SSTAR