Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0078 |
Symbol | |
ID | 6288884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 90003 |
End bp | 90710 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642623651 |
Product | Glutathione S-transferase domain |
Protein accession | YP_001897675 |
Protein GI | 187927188 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.926583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACC TCTACTACTG CGCCACGCCC AATGGCCTGA AGATGGCACT GTTCTTTGCC GAAACCGGCT TGCCGCACCG CGTCATCCCC GTCGATATCA GCCGGGGTGA CCAGTTCAAG CCCGAGTTCC TGGCCATCTC GCCCAACAAC AAGATCCCGG CCATGGTCGA TCACGACCCG GCCGAAGGCA GCGACCCCGT GGTGCTGTTT GAATCGGGCG CCATGCTGCT TTACCTGGCC GAGAAGACCG GCCAGCTGAC GCCCGCCGAC CTGCACGGCC GCATGGAAGT GCTCAAGTGG CTGTTCTGGC AGGTGGGCGG CCTGGGCCCG ATGGCCGGGC AGATCGGCCA CTTCAACGTG TATGCCCCCG AGCGCGTGCA CTACGCCATC GAGCGCTACA CCAAGGAAAC GAACCGCCTG TACGGTGTGC TCGACCGCCG CTTGGCCGAT CGCCCCTACA TTGCCGGCAA CGACTACACC ATCGCCGACA TCGCGGCCTA TCCGTGGATC GTGCCGCACG CCGGGCATGG TCAGGACCTG AACGACTTTC CGAATCTGCA GCGCTGGTTC GAAGCCGTTG GCGCACGCCC TGCCACGCAG CGCGCCTATG CCGGGGTCGA GCGCGCCTAC TCGCGCCGCC GCGAAGACAT CTCCGACGAC GAGCGCAACG TGCTGTTGGG CCAGACGGCC AGCTCCACCG CGCGCTGA
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Protein sequence | MIDLYYCATP NGLKMALFFA ETGLPHRVIP VDISRGDQFK PEFLAISPNN KIPAMVDHDP AEGSDPVVLF ESGAMLLYLA EKTGQLTPAD LHGRMEVLKW LFWQVGGLGP MAGQIGHFNV YAPERVHYAI ERYTKETNRL YGVLDRRLAD RPYIAGNDYT IADIAAYPWI VPHAGHGQDL NDFPNLQRWF EAVGARPATQ RAYAGVERAY SRRREDISDD ERNVLLGQTA SSTAR
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