Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0074 |
Symbol | |
ID | 6288837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 87263 |
End bp | 87769 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642623647 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001897671 |
Protein GI | 187927184 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACAGG CACACACCGA CGCGCAGCAA GACCCCGCGC TGCTGCGCCG CCTGCTGCGC GCCAAAGACC GCATGGACGC CGCCTCGCAC GAGGCGTGGC CCGTCAAGCG GCTGGCCGAA GTGAGCGGCG TATCGGCGGC GCATTTTGCG CGCTCGTTCA AGCAGGCCTT CGGCATTCCG CCGCACCGCT ACCTGCTCAC ACGCCGCATC GAGCAGGCCA CCACCCTGCT GCGCGACACC GACCTGCCCA TCATCGAAAT CGCTTACGCC ACAGGCTGGG AAAGCCTCGG CACCTTCGGC CGCATCTTCC GCGACATCAC CGGGCAGAGC CCGAGCGCGC TGCGCCGCCA CGCACAGGCC ACCGCGTCGC TGCAACAACT CGACCGCGTG CCCGCCTGTG TGCTGAAGGC GGCGCAGCGG CCCGACCTCG TCACAGCAGT TTCGGAGAAG CGCCGCCAGT TGGCGGAGGG TACAAATCCG TCACCCACCA ACAACAAGGA GCGGTGA
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Protein sequence | MAQAHTDAQQ DPALLRRLLR AKDRMDAASH EAWPVKRLAE VSGVSAAHFA RSFKQAFGIP PHRYLLTRRI EQATTLLRDT DLPIIEIAYA TGWESLGTFG RIFRDITGQS PSALRRHAQA TASLQQLDRV PACVLKAAQR PDLVTAVSEK RRQLAEGTNP SPTNNKER
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