Gene Rpic_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0074 
Symbol 
ID6288837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp87263 
End bp87769 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID642623647 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001897671 
Protein GI187927184 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAGG CACACACCGA CGCGCAGCAA GACCCCGCGC TGCTGCGCCG CCTGCTGCGC 
GCCAAAGACC GCATGGACGC CGCCTCGCAC GAGGCGTGGC CCGTCAAGCG GCTGGCCGAA
GTGAGCGGCG TATCGGCGGC GCATTTTGCG CGCTCGTTCA AGCAGGCCTT CGGCATTCCG
CCGCACCGCT ACCTGCTCAC ACGCCGCATC GAGCAGGCCA CCACCCTGCT GCGCGACACC
GACCTGCCCA TCATCGAAAT CGCTTACGCC ACAGGCTGGG AAAGCCTCGG CACCTTCGGC
CGCATCTTCC GCGACATCAC CGGGCAGAGC CCGAGCGCGC TGCGCCGCCA CGCACAGGCC
ACCGCGTCGC TGCAACAACT CGACCGCGTG CCCGCCTGTG TGCTGAAGGC GGCGCAGCGG
CCCGACCTCG TCACAGCAGT TTCGGAGAAG CGCCGCCAGT TGGCGGAGGG TACAAATCCG
TCACCCACCA ACAACAAGGA GCGGTGA
 
Protein sequence
MAQAHTDAQQ DPALLRRLLR AKDRMDAASH EAWPVKRLAE VSGVSAAHFA RSFKQAFGIP 
PHRYLLTRRI EQATTLLRDT DLPIIEIAYA TGWESLGTFG RIFRDITGQS PSALRRHAQA
TASLQQLDRV PACVLKAAQR PDLVTAVSEK RRQLAEGTNP SPTNNKER