Gene Rpic_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0061 
Symbol 
ID6288988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp74849 
End bp76216 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID642623634 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001897658 
Protein GI187927171 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATCG TCATCCTGGC TGCAGGCATG GGCAAACGCA TGCGCTCCGC CCTGCCGAAA 
GTGCTGCACC CCCTGACCGG CAAACCGCTG CTGGCGCACG TCATTGAAAC CGCGCGCACC
ATGTCGCCGA CGCGCCTGGT GGTGGTGGTC GGACATGGCG GTGATCGGGT GCGCGAGATG
GTTGGCGCGC CCGACATCGC CTTCGCCACG CAAGACAAGC AGCTTGGCAC GGGCCACGCC
GTCATGCAGG CCGTCGACCA GCTCGACGAG AGCGTGCCCA CCCTGGTGCT CTACGGCGAT
GTGCCGCTCA CCCGCGCCGA AACGCTGAGC GCGCTGGTAG GCGCCGCCGG CAACGACCAC
CTGGGCGTGC TGACCGTGCA TCTGGGTGAC CCGACTGGCT ACGGCCGCAT CGTGCGCGAC
GCCGCAGGCC GCATCACGCG CATCGTCGAG CAGAAAGACG CCAACGAAAC GCAACTCGCC
ATCCATGAGG TGAACACCGG CATCCTGGTG TGCCCGACGG CCAAGCTCAA GAGCTGGCTC
GCCACGCTCT CCAACGACAA CGCGCAGGGC GAGTATTACC TGACCGACGT GATCGAGCGC
GCCGCCAGCG AAGGCGTGCC GATCACGTCC GCCCACCCGC TGGCCGAGTG GGAAACGCTG
GGCGTGAACA GCAAGGTGCA ACTGGCGGAG CTGGAGCGCA TTCACCAGCG CAACCTCGCG
CAGCAACTGC TGGAAGACGG CGTGACGTTG ATCGACCCGG CGCGCATCGA CGTGCGCGGC
AAGCTCACCT GCGGCCGCGA CGTCGTGATC GACGTCAACT GCATCTTCGA GGGCGACGTC
ACGCTGGCTG ACGGCGTGCG CATCGGCGCC CATACCGTGA TCCGCGATGC CGCCATCGAG
GCCGGCGCCG AGATCCTGCC GTTCTGCCAT ATCGAGCGTG CCAAGGTTGG CGCCGACTCC
CGCATCGGCC CGTACGCGCG CCTGCGCCCG GGCACCGAGC TGGCCGAAGA CGTGCACATC
GGTAACTTTG TCGAGGTCAA GAACAGCCAG ATCGCGGCGC ACAGCAAGGC CAACCACCTG
GCCTATGTGG GCGACGCCAC GGTCGGCTCG CGCGTCAACA TCGGCGCGGG CACCATCACG
TGCAACTACG ACGGCGCGAA CAAATTCCGC ACCGTCATCG AAGACGACGC CTTCATCGGT
TCCGACACGC AGCTCGTGGC GCCGGTGCGC GTTGGCAAGG GCGCGACGCT GGGTGCCGGC
ACCACGCTGA CCAAGGATGC GCCCGAGGGC AAGCTGACGG TCTCGCGGGC GCGGCAGGTC
ACCATCGACA GCTGGCAGCG CCCGGTCAAG CAGAAGAAGG AAGGCTGA
 
Protein sequence
MNIVILAAGM GKRMRSALPK VLHPLTGKPL LAHVIETART MSPTRLVVVV GHGGDRVREM 
VGAPDIAFAT QDKQLGTGHA VMQAVDQLDE SVPTLVLYGD VPLTRAETLS ALVGAAGNDH
LGVLTVHLGD PTGYGRIVRD AAGRITRIVE QKDANETQLA IHEVNTGILV CPTAKLKSWL
ATLSNDNAQG EYYLTDVIER AASEGVPITS AHPLAEWETL GVNSKVQLAE LERIHQRNLA
QQLLEDGVTL IDPARIDVRG KLTCGRDVVI DVNCIFEGDV TLADGVRIGA HTVIRDAAIE
AGAEILPFCH IERAKVGADS RIGPYARLRP GTELAEDVHI GNFVEVKNSQ IAAHSKANHL
AYVGDATVGS RVNIGAGTIT CNYDGANKFR TVIEDDAFIG SDTQLVAPVR VGKGATLGAG
TTLTKDAPEG KLTVSRARQV TIDSWQRPVK QKKEG