| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0049 |
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| Symbol | |
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| ID | 6289749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 61653 |
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| End bp | 62471 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642623622 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001897646 |
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| Protein GI | 187927159 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.307047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGA CGCTCAACCA GTCAACTGCG GAATCGACCG CAGAATCCGC TACACAGCAG
CGCATCGCTC TCGTCACAGG CGCAGGCCGT CGCGTGGGGC GCGTCATTGC CCTGGCCCTG
GCCCGCCACG GCTGGGATGT GGCAGTGCAT TGCCACCGCT CGCGCACGGA GGCCGACGCC
GTGGCCGCCG AGATCACTGC CATGGGCCGG CGCGCCGCCG TGCTGCAGGC CGACCTCTCG
GACGAAGCTG CCGCCGGCCG CCTGATCGCC GATTGCAGCG CTGCACTGGG TACGCCCACG
TGCCTGGTCA ACAACGCGTC GCTGTTCCAG TACGACGTCG CGACCAGCTT CAGCTATGCG
TCGCTCGATA CGCACATGCG CACCAACGTG GCGGCGCCGC TGCTGCTGTC GCGCGAGCTG
CACCGTGCGC TGACTGCCGA TGGCGCCGAG CACCGCGGCG TCGTCATCAA TCTGCTCGAC
CAGAAGCTCG ATAACCTGAA CCCGGATTTC CTCTCTTACA CGTTGTCGAA GGCGGCGCTG
TCGACCGCCA CGATGCAGCT TGCGCAGGCG CTGGCGCCCG CGCTGCGCGT GGTGGGCGTG
GCGCCGGGCA TCACGATGGT GTCGGGCGAC CAGTCGCAAG GCGGGTTTGC ACGCGCGCAC
CAGATGACGC CGCTGGGCCA GTCGTCCACG CCGGAAGACA TTGCCGAGGC GGTGTGCTAC
CTCGCCACCG CCCGCGCCGT CACCGGCACC ACGCTGTTCG TCGACGGAGG CCAGCACCTG
ATGCCGCTGG CACGCGACGT GATGTTCCTG ACTGAATAA
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| Protein sequence | MAQTLNQSTA ESTAESATQQ RIALVTGAGR RVGRVIALAL ARHGWDVAVH CHRSRTEADA
VAAEITAMGR RAAVLQADLS DEAAAGRLIA DCSAALGTPT CLVNNASLFQ YDVATSFSYA
SLDTHMRTNV AAPLLLSREL HRALTADGAE HRGVVINLLD QKLDNLNPDF LSYTLSKAAL
STATMQLAQA LAPALRVVGV APGITMVSGD QSQGGFARAH QMTPLGQSST PEDIAEAVCY
LATARAVTGT TLFVDGGQHL MPLARDVMFL TE
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