| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0047 |
|---|
| Symbol | ampG |
|---|
| ID | 6287299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 59149 |
|---|
| End bp | 60438 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642623620 |
|---|
| Product | muropeptide transporter |
|---|
| Protein accession | YP_001897644 |
|---|
| Protein GI | 187927157 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00901] AmpG-related permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.252605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCC ACGATTACCT CGATATTTTT CGCAACCGCC GCATCGGCGC CATGTTGTTG
CTGGGCTTTG CCTCCGGCCT GCCGCTGGCG CTCACCTCGG GCACGCTGCA GGCCTGGATG
ACGGTGGAAG GGCTGGATAT CCGCACCATC GGGTTGTTCT CGCTGGTGGG GCAGGCGTAC
ATCTTCAAGT TCCTGTGGGC GCCGCTGATG GACCGCTTCA CACCGCCATT GATGGGCCGC
CGGCGCGGCT GGCTGGTGCT GACGCAGGCC GGGCTGGTAG CGTCGATTGC GGCCATGGCC
TTCACGCCGC CGCATGCCGC GCTCTGGGCG CTGGCTGGGC TGGCGGTGCT GGTGGCGTTT
TTATCCGCGT CGCAGGACAT CGTCTTCGAT GCCTACAGCA CCGATGTGCT GCATACGAGC
GAGCGCGGCG TCGGCGCGGC CGTGAAGGTG CTTGGCTACC GGCTGGCGAT GCTGGTGTCG
GGTGGCCTGG CGCTGTATCT GGCCGATCGC GTGATGGGCT GGAGCAACAT GTATCTGCTG
ATGGCCGGGC TGATGGCGCT GGGCATCATC ACGACGCTGT GGTCGCCCGA GCCGGAGGTG
TCGGCTCGCC CACCGCGCAG CCTGCAGGAA GCCGTGGTGG GGCCGCTGCG AGACTTCTTC
TCCCGCCGTG GCGCCTGGGC GCTGCTGGGG CTGATCGTGC TCTACAAGCT GGGCGACGCG
TTTGCGGGCA GCCTGTCGAC CACGTTCCTG ATCCGCGGCG TCGGCTTTTC CGCCGGCGAG
GTCGGCATCG TCAACAAGAC GCTCGGCTTG GCCGCCACCA TCGTGGGCGC ACTGTATGGC
GGCACGCTGA TGGTGCGGCT CGGGCTGGTG CGAGCGCTGC TGCTTTTTGG CGTGCTGCAG
GCGGTGTCGA ACCTGGGCTA CTGGGTGCTG GCCGTGACGC CGCAGCACCT GTGGACGATG
GCGGTGGCCA TCGGCATCGA GAACATCTGC GGCGGCATGG GAACGGCGGC CTTTGTGGCG
CTGCTGATGG CGCTGTGCAA CCGGTCGTTC TCGGCGACGC AGTATGCGTT GCTGTCAGCG
CTGGCTTCCA TCGGCCGCGT GTACGTTGGG CCCACCTCGG GCTACCTCGT GGAAGCCTAC
GGCTGGCCCG CGTTCTATCT GATGACCGTG GTGTTTGCCT TCCCGGGCCT TGCGCTGCTG
TGGTGGATGC GCGGCACGAT CGGCCGCTAC GAAGCCGAGC AGAACGAACG CGCCTTGGAG
GCCAAAGCGG CCAAGGCCGC GTCAGCCTGA
|
|---|
| Protein sequence | MTFHDYLDIF RNRRIGAMLL LGFASGLPLA LTSGTLQAWM TVEGLDIRTI GLFSLVGQAY
IFKFLWAPLM DRFTPPLMGR RRGWLVLTQA GLVASIAAMA FTPPHAALWA LAGLAVLVAF
LSASQDIVFD AYSTDVLHTS ERGVGAAVKV LGYRLAMLVS GGLALYLADR VMGWSNMYLL
MAGLMALGII TTLWSPEPEV SARPPRSLQE AVVGPLRDFF SRRGAWALLG LIVLYKLGDA
FAGSLSTTFL IRGVGFSAGE VGIVNKTLGL AATIVGALYG GTLMVRLGLV RALLLFGVLQ
AVSNLGYWVL AVTPQHLWTM AVAIGIENIC GGMGTAAFVA LLMALCNRSF SATQYALLSA
LASIGRVYVG PTSGYLVEAY GWPAFYLMTV VFAFPGLALL WWMRGTIGRY EAEQNERALE
AKAAKAASA
|
|---|
| |