Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0046 |
Symbol | |
ID | 6287298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 58107 |
End bp | 59051 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642623619 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001897643 |
Protein GI | 187927156 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.330738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGTG TCACACGCTC CCTGCTGACC GCAATCGGCC TCGCGCTATC TGCGTGGGCA ACCGCCATGG ACGGCCCGCT GCCCGTACCC GCCGACGGCG TGAAGCTGGA AGCGCCCACT ACCACATCGC CCAACATCCG GCTCGTCATT CCGGCCGAGG AAATCGATAA GCGCGCGCTG GCCGAATATC AGGGGATCAT CGACAACGCG GCCCACGAAG GCGCGCTGGC GCCCGACAAC GTGCCGGATC TGATCCGCAT CCGCGGCATC GTCAAACGGC TCACACCTCA GGCACCGCGC TGGAACCCCG ACGCCACGCA TTGGCAGTGG GACGTCAACT TGATCGGCTC GTCGCAGGTG AACGCGTTCT GCATGCCCGG CGGCAAGATC GCCGTGTTTT CGGGTCTCCT CGAACAGTTC AAGCTGACGG ACGACGAACT CGCCATGGCA CTCGGCCACG AGATCGCCCA CGCGTTGCGC GAACACGCCC GCGCCCGCGC CGGCCAGCGT GAAATCACCA ACCTGGGCGC CAACGTCATC TCGCAATTGT TCGGCTTCGG CAACCGGGGC GATACGGACC TGGGTGAAGG CGCCAAGATG CACCTGCTGG CCTTCTCGCG GGCGGAGGAA ACCGAGGCCG ACCTGGTCGG CATGGACATC GCTTCCCGCG CCGGCTACGA CCCGCGCGCC GCGCTCACGC TGTGGCAAAA AATGGGATCG ATCGGCGGGA CGGAGCAAAA GCAGTTTCTG TCGACGCACC CGTCGGGACG CACGCGCATG GCCGTGCTGT CGCGCCATTT GCCCGAAACG CTCACGCTGT TTGCCGACGC CCGCCATATG ACGATGGCGA AGCTGCCCGA ATATCGGTCG AACATGCAAT ATCTGGGCGC CGCACCTGTT GATAATGGCG ATGAGGCGCC GATGCGGCCG ATGCGGCGGC GGTAA
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Protein sequence | MPRVTRSLLT AIGLALSAWA TAMDGPLPVP ADGVKLEAPT TTSPNIRLVI PAEEIDKRAL AEYQGIIDNA AHEGALAPDN VPDLIRIRGI VKRLTPQAPR WNPDATHWQW DVNLIGSSQV NAFCMPGGKI AVFSGLLEQF KLTDDELAMA LGHEIAHALR EHARARAGQR EITNLGANVI SQLFGFGNRG DTDLGEGAKM HLLAFSRAEE TEADLVGMDI ASRAGYDPRA ALTLWQKMGS IGGTEQKQFL STHPSGRTRM AVLSRHLPET LTLFADARHM TMAKLPEYRS NMQYLGAAPV DNGDEAPMRP MRRR
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