Gene Rpic_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0046 
Symbol 
ID6287298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp58107 
End bp59051 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID642623619 
Productpeptidase M48 Ste24p 
Protein accessionYP_001897643 
Protein GI187927156 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.330738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTG TCACACGCTC CCTGCTGACC GCAATCGGCC TCGCGCTATC TGCGTGGGCA 
ACCGCCATGG ACGGCCCGCT GCCCGTACCC GCCGACGGCG TGAAGCTGGA AGCGCCCACT
ACCACATCGC CCAACATCCG GCTCGTCATT CCGGCCGAGG AAATCGATAA GCGCGCGCTG
GCCGAATATC AGGGGATCAT CGACAACGCG GCCCACGAAG GCGCGCTGGC GCCCGACAAC
GTGCCGGATC TGATCCGCAT CCGCGGCATC GTCAAACGGC TCACACCTCA GGCACCGCGC
TGGAACCCCG ACGCCACGCA TTGGCAGTGG GACGTCAACT TGATCGGCTC GTCGCAGGTG
AACGCGTTCT GCATGCCCGG CGGCAAGATC GCCGTGTTTT CGGGTCTCCT CGAACAGTTC
AAGCTGACGG ACGACGAACT CGCCATGGCA CTCGGCCACG AGATCGCCCA CGCGTTGCGC
GAACACGCCC GCGCCCGCGC CGGCCAGCGT GAAATCACCA ACCTGGGCGC CAACGTCATC
TCGCAATTGT TCGGCTTCGG CAACCGGGGC GATACGGACC TGGGTGAAGG CGCCAAGATG
CACCTGCTGG CCTTCTCGCG GGCGGAGGAA ACCGAGGCCG ACCTGGTCGG CATGGACATC
GCTTCCCGCG CCGGCTACGA CCCGCGCGCC GCGCTCACGC TGTGGCAAAA AATGGGATCG
ATCGGCGGGA CGGAGCAAAA GCAGTTTCTG TCGACGCACC CGTCGGGACG CACGCGCATG
GCCGTGCTGT CGCGCCATTT GCCCGAAACG CTCACGCTGT TTGCCGACGC CCGCCATATG
ACGATGGCGA AGCTGCCCGA ATATCGGTCG AACATGCAAT ATCTGGGCGC CGCACCTGTT
GATAATGGCG ATGAGGCGCC GATGCGGCCG ATGCGGCGGC GGTAA
 
Protein sequence
MPRVTRSLLT AIGLALSAWA TAMDGPLPVP ADGVKLEAPT TTSPNIRLVI PAEEIDKRAL 
AEYQGIIDNA AHEGALAPDN VPDLIRIRGI VKRLTPQAPR WNPDATHWQW DVNLIGSSQV
NAFCMPGGKI AVFSGLLEQF KLTDDELAMA LGHEIAHALR EHARARAGQR EITNLGANVI
SQLFGFGNRG DTDLGEGAKM HLLAFSRAEE TEADLVGMDI ASRAGYDPRA ALTLWQKMGS
IGGTEQKQFL STHPSGRTRM AVLSRHLPET LTLFADARHM TMAKLPEYRS NMQYLGAAPV
DNGDEAPMRP MRRR