Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0044 |
Symbol | |
ID | 6287296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 55777 |
End bp | 56685 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623617 |
Product | band 7 protein |
Protein accession | YP_001897641 |
Protein GI | 187927154 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.179688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAG TCACGGCAAG CAAGCTGCCG GTCAAACTGC TCGCGCTCGT CTTCGGCGCC GTCGCGGCGC TGGTGATCGG GCGGACTTTC CTGCTGAACT GGCAGATCAT TCCGCCCGGC TACACGGGCA TCAAGATCAA CCGGCTCGTC GATCGCGGCA TCACGCATGA AAACGTCGTC ACCGGGTTCG TGTTCTACAA CCCCGTGCAG ACCGCGATCA TTCAGTACCC GACTTACGTG CAGCGCGTGA TCTGGACGCA AGACGTGAAC GAAGGCCGCG CGCTCAACGA AGAACTGACG TTCAACACGA AGGACGCCGT GCCCGTCAAC GTGGACGTGG CCGTCTCGTA CCAACTCGAT CGCGAGAAGG TGCCGGCCTT CTACACCAAC TTCCGCGCCG ATCGCATCGA GACGTTCACG CACGGCTACC TGCGCGACAC CGCGCGCAAC GTGATCGTCG CCATGGGCTC GGAATACAAC TTTGACGACG TGAACGGCGG CAAGAAGGAA GAGTTTGTCG CGCGGCTGAC CAAGGAGCTG GACACGCGGC TCGCACCGCT GGGCGTGTCG ATCAAGCAGT TCGGCATCGT CGGCTCGCTG CGCCCGCCGC GTGCGCTGCT CGATGCAGTG AGCGCCAAGA CCAAGGCCAT CCAAGACGCG ATCCGCACTG AAAATGAAGT GCGCTCCGCC CAGGCCGAGG CCAAGAAGAA AGTGGCGATT GCCGAAGGCG AAGCCGCTGC CAACCATGCG CTCGCCTCGT CGCTGGATGA CCGGCTGCTC GCCTGGGAAC GCTTGAAGCT CGAACGTGCC GCCATCGAGA AATGGAACGG CGTGACGCCG AGCGTGATGG CTGGCGGCAA CGGCGGCGGC ATGTTTTTCA ACATCCCGGC GGGGGCGCAG AGCAAGTAA
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Protein sequence | MPEVTASKLP VKLLALVFGA VAALVIGRTF LLNWQIIPPG YTGIKINRLV DRGITHENVV TGFVFYNPVQ TAIIQYPTYV QRVIWTQDVN EGRALNEELT FNTKDAVPVN VDVAVSYQLD REKVPAFYTN FRADRIETFT HGYLRDTARN VIVAMGSEYN FDDVNGGKKE EFVARLTKEL DTRLAPLGVS IKQFGIVGSL RPPRALLDAV SAKTKAIQDA IRTENEVRSA QAEAKKKVAI AEGEAAANHA LASSLDDRLL AWERLKLERA AIEKWNGVTP SVMAGGNGGG MFFNIPAGAQ SK
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