Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0042 |
Symbol | |
ID | 6289738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 53778 |
End bp | 54563 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623615 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001897639 |
Protein GI | 187927152 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.169682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACGCA TCATTTCCGC CAACCTCAAC GGCGTTCGCT CCGCTGCCAG CAAAGGCTTT TTTGATTGGA TGGGCAAGCA GGACGCCGAT TTCGTCTGCG TGCAGGAACT GAAATGCGCG CAAGACGACA TGACCCCGGA ATTTCTGGCG CCGCACGGCT ACCACGGCGT GTTCCAGCAC GCGGTAAAGA AAGGCTACAG CGGCGCGGGC CTGTACACGC GCCACAAGCC CGACGAAGTC ATCGTCGGCT TCGATAACGG CGAGTTCGAT GCCGAAGGCC GCTACGTCGA GGCCCGCTAC GGCAAGCTGT CGGTCATCTC GGTCTACGTG CCGTCGGGCT CCAGCGGCGA AGAGCGTCAG CAGGCCAAGT TCCGCTTCAT GGACCTGTTC ATGGAGCACC TCAAGGACCT GCGCCACGAA AAGGGCCGCG AGGTCGTGCT GTGCGGCGAC GTCAACATCG TCCACAAGGA AATCGACATC AAGAACTGGA AGGGCAACCA GAAGAACTCC GGCTGCCTGC CCGAAGAGCG CGCGTGGCTG ACCAAGCTCT TCGATGAGGT CGGCTACGTG GACGTGTTCC GCACGCTCGA CCAGCGCCCC GAGCAGTACA CGTGGTGGAG CAACCGCGGC CAGGCATACG CAAAGAACGT CGGGTGGCGT ATCGATTACC AGATCGCCAC GCCGGGCATT GCCGCCACGG CACGCCGCGC GTCGATCTTC AAGGACATCA AGTTCAGCGA CCACGCGCCG CTGACGATCG ATTACGACAC GAAGCCGCAC TGGTAA
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Protein sequence | MLRIISANLN GVRSAASKGF FDWMGKQDAD FVCVQELKCA QDDMTPEFLA PHGYHGVFQH AVKKGYSGAG LYTRHKPDEV IVGFDNGEFD AEGRYVEARY GKLSVISVYV PSGSSGEERQ QAKFRFMDLF MEHLKDLRHE KGREVVLCGD VNIVHKEIDI KNWKGNQKNS GCLPEERAWL TKLFDEVGYV DVFRTLDQRP EQYTWWSNRG QAYAKNVGWR IDYQIATPGI AATARRASIF KDIKFSDHAP LTIDYDTKPH W
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