Gene Rpic_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0042 
Symbol 
ID6289738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp53778 
End bp54563 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID642623615 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001897639 
Protein GI187927152 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.169682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGCA TCATTTCCGC CAACCTCAAC GGCGTTCGCT CCGCTGCCAG CAAAGGCTTT 
TTTGATTGGA TGGGCAAGCA GGACGCCGAT TTCGTCTGCG TGCAGGAACT GAAATGCGCG
CAAGACGACA TGACCCCGGA ATTTCTGGCG CCGCACGGCT ACCACGGCGT GTTCCAGCAC
GCGGTAAAGA AAGGCTACAG CGGCGCGGGC CTGTACACGC GCCACAAGCC CGACGAAGTC
ATCGTCGGCT TCGATAACGG CGAGTTCGAT GCCGAAGGCC GCTACGTCGA GGCCCGCTAC
GGCAAGCTGT CGGTCATCTC GGTCTACGTG CCGTCGGGCT CCAGCGGCGA AGAGCGTCAG
CAGGCCAAGT TCCGCTTCAT GGACCTGTTC ATGGAGCACC TCAAGGACCT GCGCCACGAA
AAGGGCCGCG AGGTCGTGCT GTGCGGCGAC GTCAACATCG TCCACAAGGA AATCGACATC
AAGAACTGGA AGGGCAACCA GAAGAACTCC GGCTGCCTGC CCGAAGAGCG CGCGTGGCTG
ACCAAGCTCT TCGATGAGGT CGGCTACGTG GACGTGTTCC GCACGCTCGA CCAGCGCCCC
GAGCAGTACA CGTGGTGGAG CAACCGCGGC CAGGCATACG CAAAGAACGT CGGGTGGCGT
ATCGATTACC AGATCGCCAC GCCGGGCATT GCCGCCACGG CACGCCGCGC GTCGATCTTC
AAGGACATCA AGTTCAGCGA CCACGCGCCG CTGACGATCG ATTACGACAC GAAGCCGCAC
TGGTAA
 
Protein sequence
MLRIISANLN GVRSAASKGF FDWMGKQDAD FVCVQELKCA QDDMTPEFLA PHGYHGVFQH 
AVKKGYSGAG LYTRHKPDEV IVGFDNGEFD AEGRYVEARY GKLSVISVYV PSGSSGEERQ
QAKFRFMDLF MEHLKDLRHE KGREVVLCGD VNIVHKEIDI KNWKGNQKNS GCLPEERAWL
TKLFDEVGYV DVFRTLDQRP EQYTWWSNRG QAYAKNVGWR IDYQIATPGI AATARRASIF
KDIKFSDHAP LTIDYDTKPH W