Gene Rpic_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0041 
SymbolpyrE 
ID6289737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp53067 
End bp53744 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID642623614 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001897638 
Protein GI187927151 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.243068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA ACAGCGAGTT GCGCCAATCC TTCATCCGCT TTGCGGTGGA GGCCGGCGTG 
CTGTCATTCG GGGAATTCGT GACCAAGGCG GGGCGGACGT CGCCCTATTT CTTTAACGCC
GGCAAGTTCG CAGACGGCGC CCTGCTGGGC CAAGTCGCGC AATTCTATGC GAAAACCCTG
CTGGACTCGG GTGTCGAGTT CGACATGCTG TTCGGGCCGG CCTACAAGGG CATCACGCTC
GCGTCGGCCA CCGCCGTAGC CTTGGCGGGC CTGGGCCGGA ATGTGGGCTT TGCGTACAAC
CGCAAGGAAG CCAAGGACCA CGGCGAAGGC GGCAGCCTGG TCGGCGCGAA GCTGCAGGGC
CGGGTGGTGA TCGTCGATGA CGTGATCTCT GCCGGCACCT CGGTGCGCGA GTCCGTCGAG
CTGATTCGCG CCGCCGGCGC GACCCCGGCT GCTGTGCTGA TCCTGATGGA TCGGATGGAG
CGCAGCGGCA ACGCCGTGGA TATCGGCGAG CGCTCTGCGG TGCAGGATGT GCAGGCGCAG
TACGGCATGC CGGTGGTGTC GATTGCGAAT CTGGATGATT TGCTGGGGTA TCTGGATAAC
GCTGGCGACC CGGCGCTGGC TGGGTATCGG GAAAAGGCTG CTGCTTATCG GGATAAATAC
GGCGTTAGCG CGATCTGA
 
Protein sequence
MSQNSELRQS FIRFAVEAGV LSFGEFVTKA GRTSPYFFNA GKFADGALLG QVAQFYAKTL 
LDSGVEFDML FGPAYKGITL ASATAVALAG LGRNVGFAYN RKEAKDHGEG GSLVGAKLQG
RVVIVDDVIS AGTSVRESVE LIRAAGATPA AVLILMDRME RSGNAVDIGE RSAVQDVQAQ
YGMPVVSIAN LDDLLGYLDN AGDPALAGYR EKAAAYRDKY GVSAI