Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0031 |
Symbol | |
ID | 6289742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 43755 |
End bp | 44903 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642623604 |
Product | CBS domain containing membrane protein |
Protein accession | YP_001897628 |
Protein GI | 187927141 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.668358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTT CATCCCTGCA TCCCGCCCTG CGCCGCTGGC TCCACAGCTT CATTCCTGCA CCCGTGACGG TGCGCTGGAG CGAGCGCGTC CGTTCCGCAG TCGGCGCCCT CGTCGGCATC CTCTTTACCG GCACGATGAT GAAGATGGTG CCGGGCGCTT CCACCCTGAT CCCGCTGCTG GTCGCCCCAA TGGGCGCCTC TGCCGTGCTG CTGTTTGCGG TGCCCGCCAG TCCGCTCGCG CAGCCGTGGT CGATCATCGG CGGCAACCTG GTGGCGGCTA CCGTGGGCGT GACGTTCGCG CTGCTGGTGA ATGATCCGGT GATTGCCTCT GCGCTGGCCA TCTCGGCGGC CATTGCCGGC ATGTTCGCAC TGCGCTGCGT GCACCCGCCA TCGGGCGCGG TGGCGCTCAC CGCCGTGATT GGCGGCCCGG CCGTGCATGC CCTGGGCTAT CGCTTCGTGC TCGAGCCGAT CCTGATCCAG TCTGCGCTGC TGCTGGTGGG CGCGCTGGTG TACCACGCGG CCACGGGCCA CCGGTATCCG CACGCACAGC GCCTGCCCGC TGCCGAGCGT CCGCCTACCG CGGCCGGGTT CACCCGCGCC GACATCGTGG CAGCGCTGCG CCGCCAGAGC GAGCTGCTCG ACATCGACCC CGAAGACATC GAAGCCGTGC TGCGCGAGAT GCAGCTGCAG GCCTACACGC GCACCTTCCA GGCGCTCACC TGCGCGGACA TCATGACCAC GCCGGTGGTC ACGGTCTTGG CCGGCACGTC GATCCCCCGT GCATTGGAAC TGCTGCGCCA GCATGGTTTC AAGGCATTGC CGGTCGTGGA CGAAGGACGG CGCGTGGTGG GGATCGTCAC GCGTGTCGAC CTACTCGGCC TGGCGCCAGC GGACATGCGC CAGACGCTGC GCCGCTGGTT CAGCATCGGC GCGCTCACAC CCCCGCGCGT GGCCGATCAC ATGAAGACGC GCGTGCAGAC CATCGCCGCC AACGCGCCCA TGTCGGATCT GGTGCCGATG TTTGCCAGCG CCGGCCACCA CCACATTCCG GTGCTGGATG CCGACGGCCG GCTGGCCGGC ATCGTCACGG AATCCGACTT GGTGGGCGGG CTGTACCGTC AGGCCAACAT CGAGCCACAG GCGGCCTGA
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Protein sequence | MSSSSLHPAL RRWLHSFIPA PVTVRWSERV RSAVGALVGI LFTGTMMKMV PGASTLIPLL VAPMGASAVL LFAVPASPLA QPWSIIGGNL VAATVGVTFA LLVNDPVIAS ALAISAAIAG MFALRCVHPP SGAVALTAVI GGPAVHALGY RFVLEPILIQ SALLLVGALV YHAATGHRYP HAQRLPAAER PPTAAGFTRA DIVAALRRQS ELLDIDPEDI EAVLREMQLQ AYTRTFQALT CADIMTTPVV TVLAGTSIPR ALELLRQHGF KALPVVDEGR RVVGIVTRVD LLGLAPADMR QTLRRWFSIG ALTPPRVADH MKTRVQTIAA NAPMSDLVPM FASAGHHHIP VLDADGRLAG IVTESDLVGG LYRQANIEPQ AA
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