Gene Rpic_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0031 
Symbol 
ID6289742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp43755 
End bp44903 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content69% 
IMG OID642623604 
ProductCBS domain containing membrane protein 
Protein accessionYP_001897628 
Protein GI187927141 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.668358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT CATCCCTGCA TCCCGCCCTG CGCCGCTGGC TCCACAGCTT CATTCCTGCA 
CCCGTGACGG TGCGCTGGAG CGAGCGCGTC CGTTCCGCAG TCGGCGCCCT CGTCGGCATC
CTCTTTACCG GCACGATGAT GAAGATGGTG CCGGGCGCTT CCACCCTGAT CCCGCTGCTG
GTCGCCCCAA TGGGCGCCTC TGCCGTGCTG CTGTTTGCGG TGCCCGCCAG TCCGCTCGCG
CAGCCGTGGT CGATCATCGG CGGCAACCTG GTGGCGGCTA CCGTGGGCGT GACGTTCGCG
CTGCTGGTGA ATGATCCGGT GATTGCCTCT GCGCTGGCCA TCTCGGCGGC CATTGCCGGC
ATGTTCGCAC TGCGCTGCGT GCACCCGCCA TCGGGCGCGG TGGCGCTCAC CGCCGTGATT
GGCGGCCCGG CCGTGCATGC CCTGGGCTAT CGCTTCGTGC TCGAGCCGAT CCTGATCCAG
TCTGCGCTGC TGCTGGTGGG CGCGCTGGTG TACCACGCGG CCACGGGCCA CCGGTATCCG
CACGCACAGC GCCTGCCCGC TGCCGAGCGT CCGCCTACCG CGGCCGGGTT CACCCGCGCC
GACATCGTGG CAGCGCTGCG CCGCCAGAGC GAGCTGCTCG ACATCGACCC CGAAGACATC
GAAGCCGTGC TGCGCGAGAT GCAGCTGCAG GCCTACACGC GCACCTTCCA GGCGCTCACC
TGCGCGGACA TCATGACCAC GCCGGTGGTC ACGGTCTTGG CCGGCACGTC GATCCCCCGT
GCATTGGAAC TGCTGCGCCA GCATGGTTTC AAGGCATTGC CGGTCGTGGA CGAAGGACGG
CGCGTGGTGG GGATCGTCAC GCGTGTCGAC CTACTCGGCC TGGCGCCAGC GGACATGCGC
CAGACGCTGC GCCGCTGGTT CAGCATCGGC GCGCTCACAC CCCCGCGCGT GGCCGATCAC
ATGAAGACGC GCGTGCAGAC CATCGCCGCC AACGCGCCCA TGTCGGATCT GGTGCCGATG
TTTGCCAGCG CCGGCCACCA CCACATTCCG GTGCTGGATG CCGACGGCCG GCTGGCCGGC
ATCGTCACGG AATCCGACTT GGTGGGCGGG CTGTACCGTC AGGCCAACAT CGAGCCACAG
GCGGCCTGA
 
Protein sequence
MSSSSLHPAL RRWLHSFIPA PVTVRWSERV RSAVGALVGI LFTGTMMKMV PGASTLIPLL 
VAPMGASAVL LFAVPASPLA QPWSIIGGNL VAATVGVTFA LLVNDPVIAS ALAISAAIAG
MFALRCVHPP SGAVALTAVI GGPAVHALGY RFVLEPILIQ SALLLVGALV YHAATGHRYP
HAQRLPAAER PPTAAGFTRA DIVAALRRQS ELLDIDPEDI EAVLREMQLQ AYTRTFQALT
CADIMTTPVV TVLAGTSIPR ALELLRQHGF KALPVVDEGR RVVGIVTRVD LLGLAPADMR
QTLRRWFSIG ALTPPRVADH MKTRVQTIAA NAPMSDLVPM FASAGHHHIP VLDADGRLAG
IVTESDLVGG LYRQANIEPQ AA