Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0029 |
Symbol | |
ID | 6289740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 40695 |
End bp | 42893 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642623602 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001897626 |
Protein GI | 187927139 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.598305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTC TCGCGCATCA CCATGACTGC CTCGGCTGGA ACGGTGAGAT GGCGCAGCGC GTGCTGGCAT TCGATTGGGC CTCCACTGAA CTGGGCCCGA TCCAGGACTG GTCACCCAGC CTGCGTGCCG CCGTGCACAT GGTGCTGGCG TGTCCGGTGC CGCTGGTCAT GCTGTGGGGC CGCCACGGCT ACATGGTCTA CAACGATGCC TACGCCGTGT TTGCCGGCGG GCGTCATCCC TATCTGCTGG GTTGCCCCGT TGAACTGGGC TGGCCCGAAG TGGCCGACTT CAACCGCCAT GTCATGGACG TCTGCCTCGG TGGCGGCACG CTGTCGTACC GCGACAAGGA ACTTGTCCTG CTGCGCAACG GCCGCCCCGA AGACGTGTGG ATGGATCTTT ACTACAGCCC GCTGCCCGAT GACACCGGCC GCCCGGCGGG TGTGCTGGCC ATCGTGGTGG AAACCACCGA GCGCGTGCAG ACCGAGCGCG AACGGCAGGC TGCCGAACAG GCCCTGCGCC AGTTGACCGA AACGCTGGAG CAACGCGTGG CCGATGCGCT GTCTGCCCGC GCCGAAGTGG AAGCGCAATT GCGCCAGGCC CAGAAGATGG AAGCCATCGG CAACCTGACC GGCGGCGTGG CCCACGACTT CAACAACGTG CTCCAGGTGA TTGCCGGCAA TCTGCAGATG CTCTCGGTGG AGGCGCCGAA CAACACGCGC GTGCAGCATC GGATTGCCGC CGCCACGCGT GCCGTGCAGC GCGGTGCCAC GCTGGCGGCG CAGCTGCTCG CCTTTGCGCG CCGCCAGCAG CTCTCGCCGG CGGTCGTCAA CCCGACGCGG CTGGTCCAAG GCATGAGCGA GATGCTGCAC CGCGCACTGG GCGAAGCCAT CAAGGTGGAA ACGCACCTGG CCGCCGACTT GTGGAACGTC CAGGCCGACC GCAACCAGCT CGAGAACGCG CTGCTGAACC TCGCCATCAA CGCACGCGAT GCTATGCGCG GCGGCGGCAT GCTCACCATT GCCGCCAACA ACGTCACGCT CGACAACACA CAGGCGGACG TGCGTGATCA GCTTACCCCC GGCGACTACC TTGTCTTCTC CGTCACCGAT ACCGGCGTGG GCATGCCGCC CGAAGTGGTC GAACACGCTT TCGAGCCCTT CTTTACCACC AAGCCCGACG GCCACGGCAC GGGCCTGGGG CTCAGCATGG TGTTCGGCTT CGTCAAGCAG AGCGGCGGGC ACATCGCCAT CGACAGTACA GTCGGACAAG GCACCACGGT GCAGCTCTAC TTCCCGCGCT GCACGGAGGC GGCCCCGGAC GATGCCGTCG AGCTGCGCGA CACCATCGTT ACGCCCATGG GCGGGCGCGA GACCATCCTC GTGGTGGAGG ACGATACCGA CGTGCGCCTG ACCGCCGTCG ACATGCTGAC CCAACTCGGT TACCGCGTGC TCACGGCCGC CAACGGCCAG GCCGCGCTCG ACCTCATGAA CAGCGGCACG TCCATCGACC TGCTGTTTAC CGACGTGATC ATGCCAGGCC CCATCAAGGG CAGCGAACTG TCGATACGCG CCGCGCAGCG CGTGCCGCCA CTGCCGGTGC TGCTCGTCTC GGGCTATCCG CGTGACGAGG TGCAGCACGA CGGCAGGCTG CCGCCGGGTG TGACACTGCT CGGCAAGCCC TACCGGCGTG ATGACCTGGC GCGCATGGTG CGCAACGTGC TCACCGCCAG CCGCACCGCG CAGGCACAGG CGCAATCGGC ATCGCCATCG GCGGGCCCTG CCGTGGCTAC AGACGCTTCA CAACCGCCTG CGGTGCTGCT GGTGGAAGAC GACACCGCCT CGCGCGAAGC CATGCAGGAG GTGCTCACCA CCTTCGGCCT GCAATGCGTG GCCGCCGTCA ATGCCGAAGA CGCCCTTGCA CTGGCCCGCA CGCGCTCCGT TCAGGTGCTG CTGACCGACC TCACCCTGCC CGGCCAATCC GGCGCGAACC TCGCCCGCAC GCTGCTGCGC ATGCAACCGC AACTGCAGGT GCTGCTGATG TCCGGCTATG GCACGGAAGC CGAGATTGGC GAGCCCATTG CCGGCGCACG CCTGCTCGGC AAACCGATCG ACCTGATGAC GCTGCAGCAG GCGCTGGCGC CGTGGCTCGG CGCAACCGTA AGGGCTGCCG ATACGCAGAA TGTGACGAAC GCCGCATAA
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Protein sequence | MPFLAHHHDC LGWNGEMAQR VLAFDWASTE LGPIQDWSPS LRAAVHMVLA CPVPLVMLWG RHGYMVYNDA YAVFAGGRHP YLLGCPVELG WPEVADFNRH VMDVCLGGGT LSYRDKELVL LRNGRPEDVW MDLYYSPLPD DTGRPAGVLA IVVETTERVQ TERERQAAEQ ALRQLTETLE QRVADALSAR AEVEAQLRQA QKMEAIGNLT GGVAHDFNNV LQVIAGNLQM LSVEAPNNTR VQHRIAAATR AVQRGATLAA QLLAFARRQQ LSPAVVNPTR LVQGMSEMLH RALGEAIKVE THLAADLWNV QADRNQLENA LLNLAINARD AMRGGGMLTI AANNVTLDNT QADVRDQLTP GDYLVFSVTD TGVGMPPEVV EHAFEPFFTT KPDGHGTGLG LSMVFGFVKQ SGGHIAIDST VGQGTTVQLY FPRCTEAAPD DAVELRDTIV TPMGGRETIL VVEDDTDVRL TAVDMLTQLG YRVLTAANGQ AALDLMNSGT SIDLLFTDVI MPGPIKGSEL SIRAAQRVPP LPVLLVSGYP RDEVQHDGRL PPGVTLLGKP YRRDDLARMV RNVLTASRTA QAQAQSASPS AGPAVATDAS QPPAVLLVED DTASREAMQE VLTTFGLQCV AAVNAEDALA LARTRSVQVL LTDLTLPGQS GANLARTLLR MQPQLQVLLM SGYGTEAEIG EPIAGARLLG KPIDLMTLQQ ALAPWLGATV RAADTQNVTN AA
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