Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0028 |
Symbol | |
ID | 6288266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 39715 |
End bp | 40623 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642623601 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_001897625 |
Protein GI | 187927138 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.467256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGC CCAGCCCCGA CCGCACCACC CGCACCGACA GCGAAGACAC GACCTTCACC GCCGTCCGGC CCCGCCTCTT TGCGATTGCC TATCGCATGC TCGGCAGCCG CGCTGACGCT GAAGACGTGC TGCAAGACGC CTGGATGCGC TGGCACCAAA CCGACCAGAC CGCGCTGCAA TCGGCCGAGG CATGGCTCGT GACGGTGGTC ACTCGCCTGT CGATCGACCG CCTGCGCGCC GCCAAGACCG AGCGCGAAGC CTACGTCGGC TGGTGGCTGC CCGAGCCGCT GGTTGAACCC GAAAGCCACG CCCCCACGCC CGAAACCGCC GTGGAACTGG CAGGCGATGT GTCGATGGCC CTGCTGTGGG TGCTCGAGCG CCTGTCGCCC GAAGAGCGCG CGGCGTTTCT GATGCGCCAG GTATTCGATC AGGATTACTC GGAGATCGCC GCCCTGCTGG GCAAGACCGA AGCCGCGTGC CGGCAGATGG TGCACCGCGC ATCAGACCGG GTGCAGCAGG AGCGCCCGCG CTTCGATGTC GCGCCCGATG CGCATCGGGA CTTGCTCGAG CGCTTTGCGC AAGCCTCACG CACGGGCCAA CGCGATGCCA TCCGCGCGCT GCTGGCAGAT GACGCGCAAC TCGTGGGCGA CGGCGGCGGC AAGGTGCCGT CGTTCACGCG CATCATTCAA GACGCCGGTC AGATCACCAA GATCTACTGC GAGCTGGTGC GCGCCATGGG CGACGTCCGC TACGTACACG CCCGCGTGAA CGGCGAGCCC GGCCTGCTGC GCTACGTGGA TGGCAAGCTG GAATCGGCGC AGTCGTTCGT CATCGAGAAC GGCCAGATCG TGGCCATCTA CGTGGTGCGC AATCCGGACA AGCTGGCGCA CATCGGCATC GGCGCATAA
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Protein sequence | MTKPSPDRTT RTDSEDTTFT AVRPRLFAIA YRMLGSRADA EDVLQDAWMR WHQTDQTALQ SAEAWLVTVV TRLSIDRLRA AKTEREAYVG WWLPEPLVEP ESHAPTPETA VELAGDVSMA LLWVLERLSP EERAAFLMRQ VFDQDYSEIA ALLGKTEAAC RQMVHRASDR VQQERPRFDV APDAHRDLLE RFAQASRTGQ RDAIRALLAD DAQLVGDGGG KVPSFTRIIQ DAGQITKIYC ELVRAMGDVR YVHARVNGEP GLLRYVDGKL ESAQSFVIEN GQIVAIYVVR NPDKLAHIGI GA
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