| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0025 |
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| Symbol | |
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| ID | 6288263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 36686 |
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| End bp | 38254 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642623598 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_001897622 |
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| Protein GI | 187927135 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.932986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC TTTTAATCGC CAAAGCGCAA CGCAGCAGCA GCGCATACAC ACAACCCACA
CCGGCACCGA TTCCGCCCGA CGCCCCGCGG CACGCACGCG GCATGCACGG CGCCGCGCTG
GTGATGGCCG CCGCGCTGTC GCTGGGGCTC AGTGCCTGCG GTGGCGGCGA AGATGCCGGT
ACCACGACCC CACCGACGAA CAACAACACG CCAGCCCCCA CCCCGTCACC CGCGCCCACA
CCGGCGCCCA AACCGACGCC ATCGCCATCA CCTGCGCCCA CACCAACGCC GGCGCCCACA
CCTGCGCCAG CGCCGGCGAC CTATTCCGTG GGCGGTACCG TCAGCGGGCT GACCAGCGGC
AAGTCCGTCA CGCTGCTGGA CAACGGCGGC GATGCGGTTG TCGTCAACGC CAATGGCAGC
TTCAACTTCC CGACCAAGCT CGCGCAGGGC AAGCCCTATG CAGCGACGGT CGGAACGCGG
CCTTCGGGTG AGAACTGCAC CGTCACCAAC GGCAGCGGCA CCGTGGGCAC CAGCAACGTG
ACCACCATTG CGGTGGCCTG CACGCCCAAG CCCCTGTTCG GCTATGCGGT CAACTCGAAC
GACGGCACCA TCTCGGCCTT CACGCTGGAT GCGACCACCG GCATGCCCAC CGCAGTCGGC
ACGGCAGTGG CGGTGGGAGC AGGGCCGCTG TCGCTGACCA TCGACCCGGC GGGCAAGTTC
GTCTACGTGG CCAACGCCAA CGCCAACACC GTCACCACGC TCTCCATCAA TGCCGATACC
GGACTGCTCA CGGTAGTCGG CTCGGCCACA CCCACGGGCG TGCAGCCCTA TAGCATTGCG
CGCACGCCCA ACGGCAAGTT CGCATACACG ACCAACTATG GAGACAACAC GCTGTCGGCG
TTCTCCGTCA ACACGGGCAC CGGTGCACTG ACCGCGCTCG CGCCCATCAC CGCCGGGGCC
AACCCGTACA CGGTCGCCAT CAACAGCGCA GGCACCTTCG CCTACGTGGT CAACGCCAAC
AGCGGCGCCA CGCCGGGCAC GGCCATGGCG TTTGCCGTCA ACAACACAAC GGGCGCACTC
ACGCAGGTGG GCACCACGGT CAACACGGGC AACACGCCGC AGTTCATCGC GGTCAACTCG
GCGGGCACCT ACGCCTACGT GACCAACGCC GCAGACAACA CCATCAACGT CTACAGCATC
AGCAACACCG GGGCGCTCAC CGCATCGGGC ACACCGGTGG CGGCAGGCAC CAACCCGTAC
TACATCGCCA TCGCACCGTC GGGCGGCTTC ATGTACGTGA CCAACGTGCT GGCCAACACG
GTCAGCGTCT TCAGCATCAA CCCGTCCAAC GGCGCCCTCA CGCTGGTCGA CACCACGCCC
ACCGGCAACG CGCCCGTGAC CGTGCTCGTC AACCCCGCCG GCACCTTCGC CTACGTGGTC
AACGCCGTGG ACAACAGCGT CAGCGCGTAC AGCATCAACA GCACCACCGG CAAGCTGACC
GCCGTGGCAA GCGGGTCAGC CGCCACCGGC AACATCCCGC GCGGGATGGC GATCGTGGCG
GTGCCGTGA
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| Protein sequence | MAELLIAKAQ RSSSAYTQPT PAPIPPDAPR HARGMHGAAL VMAAALSLGL SACGGGEDAG
TTTPPTNNNT PAPTPSPAPT PAPKPTPSPS PAPTPTPAPT PAPAPATYSV GGTVSGLTSG
KSVTLLDNGG DAVVVNANGS FNFPTKLAQG KPYAATVGTR PSGENCTVTN GSGTVGTSNV
TTIAVACTPK PLFGYAVNSN DGTISAFTLD ATTGMPTAVG TAVAVGAGPL SLTIDPAGKF
VYVANANANT VTTLSINADT GLLTVVGSAT PTGVQPYSIA RTPNGKFAYT TNYGDNTLSA
FSVNTGTGAL TALAPITAGA NPYTVAINSA GTFAYVVNAN SGATPGTAMA FAVNNTTGAL
TQVGTTVNTG NTPQFIAVNS AGTYAYVTNA ADNTINVYSI SNTGALTASG TPVAAGTNPY
YIAIAPSGGF MYVTNVLANT VSVFSINPSN GALTLVDTTP TGNAPVTVLV NPAGTFAYVV
NAVDNSVSAY SINSTTGKLT AVASGSAATG NIPRGMAIVA VP
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