Gene Rpic_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0021 
Symbol 
ID6287369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp32307 
End bp33263 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID642623594 
Productprotein of unknown function UPF0187 
Protein accessionYP_001897618 
Protein GI187927131 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTCC GCCCCCATTT GCACTGGTTC CGCATGCTGC TCGCATGGCG CGGGTCGGTG 
TTGCCGCAGC TTCTGCCGCG CCTGTTCCTC ATCTTCTTCG TGTCGTTAGT GGCCATCGCG
GTGCATGCGC ACCTGCTGCC CGTCTCCGTC AACCTGAGCA CGACGCCGTT CTCGCTCGTC
GGCATTGCGC TGGCGGTGTT CCTGGGCTTT CGCAACAACG CCAGCTACGA CCGCTACTGG
GAGGCCCGCA AGCTCTGGGG CCAGTTGCTC AACACGGCGC GTTCGCTCAC GCGCCAGGCA
CTGACGCTGC CGCGCGGGGA TGGCACAAAT GGCCCCAATG GCCCGAACAG CGGCGTGACC
GATGCCGACG TCCGCGAGTT CGCACAGGTG CTGGGCGCGC TGCCGCACGC GCTGCGCCAC
CAGTTGCGCC ACACCGATGC GCGCGAAGAC CTCGCCACCC GGCTGCCCGC AGCGTTGCTC
GAACGCGTGA TGGCCGCGCG CTACCGGCCC ATCGTCATCG TGCAGTGGAT GGGTGAATGG
GTGCAGCGTC GCGCGCAAGC CGGTGCGCTC GATGGGTACG CCGCCCTGGC GTTCGACCGC
AACCTCAACG AGTTGTCGAA CAGCATCGGC GGGTGCGAGC GCATTGCGGG CACGCCGCTG
CCGTTTGCTT ACTCGGTCAT GATCCACCGC ACGGTGTACT TCTTCTGCGC GGCACTGCCG
TTTGGGCTGG TGGAAAGCAT CGGCAGTTTC ACGCCCGTGT TTGCGGTGTT CGTGGCGTAC
ACCTTCATGG CGCACGAGGC CATCGCCTCG CAGCTGGAAG ACCCGTTCGG CACGGAAGAC
AACGACCTCG CGCTCAACGC GCTGTCCAAC ACGATTGAAG ATGCGGTGCT CGACATCCTT
GGCGAGCCGA GCCCGCTGCC GCGTGCGGGC GTGCGGCGTG GGGTGATCTT CGATTGA
 
Protein sequence
MVVRPHLHWF RMLLAWRGSV LPQLLPRLFL IFFVSLVAIA VHAHLLPVSV NLSTTPFSLV 
GIALAVFLGF RNNASYDRYW EARKLWGQLL NTARSLTRQA LTLPRGDGTN GPNGPNSGVT
DADVREFAQV LGALPHALRH QLRHTDARED LATRLPAALL ERVMAARYRP IVIVQWMGEW
VQRRAQAGAL DGYAALAFDR NLNELSNSIG GCERIAGTPL PFAYSVMIHR TVYFFCAALP
FGLVESIGSF TPVFAVFVAY TFMAHEAIAS QLEDPFGTED NDLALNALSN TIEDAVLDIL
GEPSPLPRAG VRRGVIFD